Division of Epidemiology and Disease Control, University of Texas, Health Science Center at Houston, School of Public Health, Brownsville Regional Campus, Brownsville, TX, USA.
BMC Infect Dis. 2010 Jan 21;10:13. doi: 10.1186/1471-2334-10-13.
Gonorrhea is a major sexually transmitted disease (STD) in many countries worldwide. The emergence of fluoroquinolone resistance has complicated efforts to control and treat this disease. We report the first study of the evolutionary processes acting on transmission dynamics of a resistant gonococcal population from Shanghai, China. We compare these findings with our previous study of the evolution of a fluoroquinolone sensitive gonococcal population from Baltimore, MD.
Ninety six gonococcal samples were collected from male patients in Shanghai, China. All samples were fluoroquinolone resistant. Seven MLST housekeeping genes, two fluoroquinolone resistance genes (gyrA and parC) and the porB gene were sequenced and subjected to population genetic and evolutionary analyses. We estimated genetic diversity, recombination, growth, and selective pressure. The evolutionary history and population dynamics of the Shanghai population were also inferred and compared with that observed in a fluoroquinolone sensitive gonococcal population from Baltimore.
For both populations, mutation plays a larger role than recombination in the evolution of the porB gene, whereas the latter seems to be the main force driving the evolution of housekeeping and fluoroquinolone resistance genes. In both populations there was evidence for positively selected sites in all genes analyzed. The phylogenetic analyses showed no temporal clustering in the Shanghai gonococcal population, nor did we detect shared allelic profiles between the Shanghai and the Baltimore populations. Past population dynamics of gonococcal strains from Shanghai showed a rising relative effective population size (Ne) in MLST genes with a declining relative Ne for gyrA and parC, whereas among sensitive strains from Baltimore we previously observed concordance among these genes. In both Shanghai and Baltimore, the past population dynamics of gonococcal strains tracked changes in the prevalence of gonorrhea.
Our study illustrates both similarities and differences in the evolutionary processes acting on gonococcal populations in different geographic areas. An explanation of this pattern that may apply in China is the continued use of quinolone antibiotics despite widespread resistance. Population genetic analysis of gonococcal strains in conjunction with epidemiological surveillance may provide insights into the epidemic behavior of antibiotic resistant strains and help to design control measures.
淋病是世界上许多国家的主要性传播疾病(STD)。氟喹诺酮类药物耐药性的出现使控制和治疗这种疾病的努力变得复杂。我们报告了首例来自中国上海的耐药淋病奈瑟菌种群传播动力学作用的进化过程研究。我们将这些发现与我们之前对马里兰州巴尔的摩市氟喹诺酮敏感淋病奈瑟菌种群进化的研究进行了比较。
从中国上海的男性患者中采集了 96 株淋病奈瑟菌。所有样本均对氟喹诺酮类药物具有耐药性。对 7 个 MLST 管家基因、2 个氟喹诺酮耐药基因(gyrA 和 parC)和 porB 基因进行了测序,并进行了群体遗传和进化分析。我们估计了遗传多样性、重组、生长和选择压力。还推断了上海人群的进化历史和种群动态,并与巴尔的摩市氟喹诺酮敏感淋病奈瑟菌种群的观察结果进行了比较。
对于这两个群体,突变在 porB 基因的进化中比重组发挥更大的作用,而后者似乎是驱动管家基因和氟喹诺酮耐药基因进化的主要力量。在两个群体中,在所分析的所有基因中都有证据表明存在正选择位点。系统发育分析显示,上海淋病奈瑟菌种群中没有时间聚类,也没有检测到上海和巴尔的摩种群之间共享的等位基因谱。过去上海淋病奈瑟菌菌株的种群动态显示,MLST 基因的相对有效种群大小(Ne)呈上升趋势,而 gyrA 和 parC 的 Ne 呈下降趋势,而我们之前在巴尔的摩的敏感菌株中观察到这些基因之间的一致性。在上海和巴尔的摩,淋病奈瑟菌菌株的过去种群动态与淋病的流行率变化相吻合。
我们的研究说明了不同地理区域的淋病奈瑟菌种群的进化过程既有相似之处,也有不同之处。在中国可能适用的一种解释是,尽管广泛存在耐药性,但仍继续使用喹诺酮类抗生素。结合流行病学监测的淋病奈瑟菌菌株的群体遗传分析可以深入了解抗生素耐药菌株的流行行为,并有助于设计控制措施。