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本文引用的文献

1
Imaging the quantal substructure of single IP3R channel activity during Ca2+ puffs in intact mammalian cells.对完整哺乳动物细胞中Ca2+ 释放期间单个IP3R通道活性的量子亚结构进行成像。
Proc Natl Acad Sci U S A. 2009 Apr 14;106(15):6404-9. doi: 10.1073/pnas.0810799106. Epub 2009 Mar 30.
2
Simplified model of cytosolic Ca2+ dynamics in the presence of one or several clusters of Ca2+ -release channels.存在一个或多个钙离子释放通道簇时胞质钙离子动力学的简化模型
Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Oct;78(4 Pt 1):041915. doi: 10.1103/PhysRevE.78.041915. Epub 2008 Oct 23.
3
Localization of puff sites adjacent to the plasma membrane: functional and spatial characterization of Ca2+ signaling in SH-SY5Y cells utilizing membrane-permeant caged IP3.与质膜相邻的胀泡位点的定位:利用膜通透性笼化肌醇三磷酸对SH-SY5Y细胞中Ca2+信号进行功能和空间表征
Cell Calcium. 2009 Jan;45(1):65-76. doi: 10.1016/j.ceca.2008.06.001. Epub 2008 Jul 17.
4
Calcium-dependent inactivation and the dynamics of calcium puffs and sparks.钙依赖性失活以及钙瞬变和钙火花的动力学
J Theor Biol. 2008 Aug 7;253(3):483-99. doi: 10.1016/j.jtbi.2008.03.026. Epub 2008 Mar 28.
5
Characterization of local calcium signals in tubular networks of endoplasmic reticulum.内质网管状网络中局部钙信号的表征
Cell Calcium. 2007 Sep;42(3):245-60. doi: 10.1016/j.ceca.2006.12.001. Epub 2007 Jan 22.
6
The number and spatial distribution of IP3 receptors underlying calcium puffs in Xenopus oocytes.非洲爪蟾卵母细胞中钙瞬变背后的肌醇三磷酸受体的数量和空间分布。
Biophys J. 2006 Dec 1;91(11):4033-44. doi: 10.1529/biophysj.106.088880. Epub 2006 Sep 15.
7
'Trigger' events precede calcium puffs in Xenopus oocytes.在非洲爪蟾卵母细胞中,“触发”事件先于钙瞬变发生。
Biophys J. 2006 Dec 1;91(11):4024-32. doi: 10.1529/biophysj.106.088872. Epub 2006 Sep 15.
8
Simple data-driven models of intracellular calcium dynamics with predictive power.具有预测能力的细胞内钙动力学简单数据驱动模型。
Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Jul;74(1 Pt 1):011917. doi: 10.1103/PhysRevE.74.011917. Epub 2006 Jul 26.
9
Analysis of puff dynamics in oocytes: interdependence of puff amplitude and interpuff interval.卵母细胞中胀泡动态分析:胀泡幅度与胀泡间期的相互依存关系。
Biophys J. 2006 Jun 1;90(11):3897-907. doi: 10.1529/biophysj.105.075911. Epub 2006 Mar 13.
10
"Optical patch-clamping": single-channel recording by imaging Ca2+ flux through individual muscle acetylcholine receptor channels.“光学膜片钳技术”:通过成像单个肌肉乙酰胆碱受体通道的Ca2+通量进行单通道记录。
J Gen Physiol. 2005 Sep;126(3):179-92. doi: 10.1085/jgp.200509331. Epub 2005 Aug 15.

量化爪蟾卵母细胞中钙爆发的钙流。

Quantifying calcium fluxes underlying calcium puffs in Xenopus laevis oocytes.

机构信息

Departamento de Física, Facultad de Ciencias Exactas y Naturales, UBA, Ciudad Universitaria, Pabellón I, 1428 Buenos Aires, Argentina.

出版信息

Cell Calcium. 2010 Mar;47(3):273-86. doi: 10.1016/j.ceca.2009.12.012. Epub 2010 Jan 25.

DOI:10.1016/j.ceca.2009.12.012
PMID:20097419
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2839043/
Abstract

We determine the calcium fluxes through inositol 1,4,5-trisphosphate receptor/channels underlying calcium puffs of Xenopus laevis oocytes using a simplified version of the algorithm of Ventura et al. An analysis of 130 puffs obtained with Fluo-4 indicates that Ca2+ release comes from a region of width approximately 450 nm, that the release duration is peaked around 18 s and that the underlying Ca2+ currents range between 0.12 and 0.95 pA. All these parameters are independent of IP(3) concentration. We explore what distributions of channels that open during a puff, N(p), and what relations between current and number of open channels, I(N(p)), are compatible with our findings and with the distribution of puff-to-trigger amplitude ratio reported in Rose et al. To this end, we use simple "mean field" models in which all channels open and close simultaneously. We find that the variability among clusters plays an important role in shaping the observed puff amplitude distribution and that a model for which I(N(p)) approximately N(p) for small N(p) and I(N(p)) approximately N(p)(1/alpha) (alpha > 1) for large N(p), provides the best agreement. Simulations of more detailed models in which channels open and close stochastically show that this nonlinear behavior can be attributed to the limited time resolution of the observations and to the averaging procedure that is implicit in the mean-field models. These conclusions are also compatible with observations of approximately 400 puffs obtained using the dye Oregon green.

摘要

我们使用 Ventura 等人算法的简化版本来确定 Xenopus laevis 卵母细胞中肌醇 1,4,5-三磷酸受体/通道引起钙脉冲的钙流。对用 Fluo-4 获得的 130 个脉冲的分析表明,Ca2+释放来自宽度约为 450nm 的区域,释放持续时间在 18s 左右达到峰值,而基础 Ca2+电流在 0.12 和 0.95pA 之间。所有这些参数都与 IP3 浓度无关。我们探讨了在一个脉冲期间开放的通道数量 N(p)的分布,以及电流和开放通道数量之间的关系 I(N(p)),与我们的发现以及 Rose 等人报道的脉冲触发幅度比分布有何关系。为此,我们使用了简单的“平均场”模型,其中所有通道同时打开和关闭。我们发现,簇之间的变异性在塑造观察到的脉冲幅度分布方面起着重要作用,并且对于 I(N(p))对于小 N(p)近似于 N(p),对于大 N(p)近似于 N(p)(1/alpha)(alpha>1)的模型,提供了最佳的一致性。对其中通道随机打开和关闭的更详细模型的模拟表明,这种非线性行为可以归因于观察的时间分辨率有限,以及平均场模型中隐含的平均过程。这些结论也与使用染料 Oregon green 获得的大约 400 个脉冲的观察结果一致。