Ullah Ghanim, Ullah Aman
Department of Physics, University of South Florida, Tampa, FL, 33620, USA.
Department of Molecular Neuroscience, Krasnow Institute for Advanced Study, George Mason University, Fairfax, VA, 22030, USA.
J Biol Phys. 2016 Oct;42(4):507-524. doi: 10.1007/s10867-016-9419-2. Epub 2016 May 6.
The inositol 1,4,5-trisphosphate (InsP) receptor (InsPR) channel is crucial for the generation and modulation of highly specific intracellular Ca signals performing numerous functions in animal cells. However, the single channel behavior during Ca signals of different spatiotemporal scales is not well understood. To elucidate the correlation between the gating dynamics of single InsPRs and spatiotemporal Ca patterns, we simulate a cluster of InsPRs under varying ligand concentrations and extract comprehensive gating statistics of all channels during events of different sizes and durations. Our results show that channels gating predominantly in the low activity mode with negligible occupancy of intermediate and high modes leads to single channel Ca release event blips. Increasing occupancies of intermediate and high modes results in events with increasing size. When the channel has more than 50% probability of gating in the intermediate and high modes, the cluster generates very large puffs that would most likely result in global Ca signals. The size, duration and frequency of Ca signals all increase linearly with the total probability of channel gating in the intermediate and high modes. To our knowledge, this is the first study that quantitatively relates the modal characteristics of InsPR to the shaping of different spatiotemporal scales of Ca signals.
肌醇1,4,5 - 三磷酸(InsP)受体(InsPR)通道对于动物细胞中高度特异性的细胞内钙信号的产生和调节至关重要,这些钙信号执行着众多功能。然而,不同时空尺度的钙信号期间单通道行为尚未得到很好的理解。为了阐明单个InsPR的门控动力学与时空钙模式之间的相关性,我们在不同配体浓度下模拟了一组InsPR,并在不同大小和持续时间的事件期间提取了所有通道的综合门控统计数据。我们的结果表明,通道主要以低活性模式门控,中间和高模式的占有率可忽略不计,这会导致单通道钙释放事件出现尖峰。中间和高模式占有率的增加会导致事件规模增大。当通道在中间和高模式门控的概率超过50%时,该组通道会产生非常大的钙瞬变,很可能导致全局钙信号。钙信号的大小、持续时间和频率均与通道在中间和高模式门控的总概率呈线性增加。据我们所知,这是第一项定量关联InsPR的模式特征与不同时空尺度钙信号形成的研究。