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大肠杆菌 rpoB 突变体能以与其适应缺陷成比例的方式提高可进化性。

Escherichia coli rpoB mutants have increased evolvability in proportion to their fitness defects.

机构信息

Department of Microbiology and Molecular Genetics, Michigan State University, USA.

出版信息

Mol Biol Evol. 2010 Jun;27(6):1338-47. doi: 10.1093/molbev/msq024. Epub 2010 Jan 27.

DOI:10.1093/molbev/msq024
PMID:20106907
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2872623/
Abstract

Evolvability is the capacity of an organism or population for generating descendants with increased fitness. Simulations and comparative studies have shown that evolvability can vary among individuals and identified characteristics of genetic architectures that can promote evolvability. However, little is known about how the evolvability of biological organisms typically varies along a lineage at each mutational step in its history. Evolvability might increase upon sustaining a deleterious mutation because there are many compensatory paths in the fitness landscape to reascend the same fitness peak or because shifts to new peaks become possible. We use genetic marker divergence trajectories to parameterize and compare the evolvability--defined as the fitness increase realized by an evolving population initiated from a test genotype--of a series of Escherichia coli mutants on multiple timescales. Each mutant differs from a common progenitor strain by a mutation in the rpoB gene, which encodes the beta subunit of RNA polymerase. Strains with larger fitness defects are proportionally more evolvable in terms of both the beneficial mutations accessible in their immediate mutational neighborhoods and integrated over evolutionary paths that traverse multiple beneficial mutations. Our results establish quantitative expectations for how a mutation with a given deleterious fitness effect should influence evolvability, and they will thus inform future studies of how deleterious, neutral, and beneficial mutations targeting other cellular processes impact the evolutionary potential of microorganisms.

摘要

可进化性是生物体或种群产生具有更高适应性后代的能力。模拟和比较研究表明,可进化性可以在个体之间变化,并确定了可以促进可进化性的遗传结构特征。然而,对于生物生物体的可进化性通常如何在其历史上的每个突变步骤沿着谱系变化,知之甚少。可进化性可能会增加,因为在适应度景观中有许多补偿途径可以重新达到相同的适应度峰值,或者因为向新的峰值转移成为可能。我们使用遗传标记分歧轨迹来参数化和比较一系列大肠杆菌突变体在多个时间尺度上的可进化性——定义为从测试基因型开始的进化种群实现的适应度增加。每个突变体与一个常见的祖先菌株的区别在于 rpoB 基因的突变,该基因编码 RNA 聚合酶的β亚基。具有较大适应度缺陷的菌株在其直接突变邻域中可获得的有益突变和穿越多个有益突变的进化路径上的综合方面都具有比例更高的可进化性。我们的结果为具有给定有害适应度效应的突变应该如何影响可进化性提供了定量的预期,从而为未来研究针对其他细胞过程的有害、中性和有益突变如何影响微生物的进化潜力提供了信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c947/2872623/93120d133ebf/molbiolevolmsq024f03_ht.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c947/2872623/6f3ff2234bf1/molbiolevolmsq024f01_3c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c947/2872623/f0968966ba3d/molbiolevolmsq024f02_ht.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c947/2872623/93120d133ebf/molbiolevolmsq024f03_ht.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c947/2872623/6f3ff2234bf1/molbiolevolmsq024f01_3c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c947/2872623/f0968966ba3d/molbiolevolmsq024f02_ht.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c947/2872623/93120d133ebf/molbiolevolmsq024f03_ht.jpg

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