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多种Oct2异构体通过可变剪接产生。

Multiple Oct2 isoforms are generated by alternative splicing.

作者信息

Wirth T, Priess A, Annweiler A, Zwilling S, Oeler B

机构信息

Zentrum für Molekulare Biologie, Universität Heidelberg (ZMBH), FRG.

出版信息

Nucleic Acids Res. 1991 Jan 11;19(1):43-51. doi: 10.1093/nar/19.1.43.

DOI:10.1093/nar/19.1.43
PMID:2011512
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC333532/
Abstract

The interaction of the Oct2 transcription factor with the cognate octamer motif ATGCAAAT is a critical determinant of the lymphoid-specific expression of immunoglobulin genes. Ectopic expression of cloned Oct2 cDNA was shown to be sufficient to reconstitute at least some aspects of this regulation in non-lymphoid cells. We describe the isolation and characterization of multiple cDNAs encoding mouse Oct2 from a mature B-cell line and we show that a variety of isoforms of this transcription factor is generated from a single gene by an alternative splicing mechanism. All the isoforms retain the previously characterized POU-domain and are therefore able to bind to the octamer motif. Different amounts of the various isoforms are present within the same B-cell regardless of the developmental stage of B-cell differentiation and at least some of the isoforms are conserved between mouse and humans. In cotransfection experiments we show that all the isoforms are able to activate an octamer containing promoter element in fibroblasts revealing an unexpected functional redundancy. Finally, we show that one of the isoforms encodes the previously described lymphoid-specific Oct2B protein which has been suggested to be involved in the function of the octamer motif in the context of the immunoglobulin heavy-chain (IgH) enhancer.

摘要

Oct2转录因子与同源八聚体基序ATGCAAAT的相互作用是免疫球蛋白基因淋巴特异性表达的关键决定因素。已证明克隆的Oct2 cDNA的异位表达足以在非淋巴细胞中重建这种调控的至少某些方面。我们描述了从成熟B细胞系中分离和鉴定多个编码小鼠Oct2的cDNA,并表明该转录因子的多种同工型是通过可变剪接机制从单个基因产生的。所有同工型都保留了先前表征的POU结构域,因此能够结合八聚体基序。无论B细胞分化的发育阶段如何,同一B细胞内都存在不同数量的各种同工型,并且至少某些同工型在小鼠和人类之间是保守的。在共转染实验中,我们表明所有同工型都能够激活成纤维细胞中含八聚体的启动子元件,揭示了意想不到的功能冗余。最后,我们表明其中一种同工型编码先前描述的淋巴特异性Oct2B蛋白,有人认为该蛋白在免疫球蛋白重链(IgH)增强子的背景下参与八聚体基序的功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5ef2/333532/d7f56ab00d72/nar00237-0065-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5ef2/333532/67b427b45c59/nar00237-0062-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5ef2/333532/dd00aa1b546b/nar00237-0063-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5ef2/333532/a53179817190/nar00237-0063-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5ef2/333532/3a5d82c2de8f/nar00237-0064-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5ef2/333532/d7f56ab00d72/nar00237-0065-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5ef2/333532/67b427b45c59/nar00237-0062-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5ef2/333532/dd00aa1b546b/nar00237-0063-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5ef2/333532/a53179817190/nar00237-0063-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5ef2/333532/3a5d82c2de8f/nar00237-0064-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5ef2/333532/d7f56ab00d72/nar00237-0065-a.jpg

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1
Multiple Oct2 isoforms are generated by alternative splicing.多种Oct2异构体通过可变剪接产生。
Nucleic Acids Res. 1991 Jan 11;19(1):43-51. doi: 10.1093/nar/19.1.43.
2
Characterization of Oct2 from the channel catfish: functional preference for a variant octamer motif.斑点叉尾鮰Oct2的特性:对一种变异八聚体基序的功能偏好
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3
Oct2 transactivation from a remote enhancer position requires a B-cell-restricted activity.来自远端增强子位置的Oct2反式激活需要一种B细胞限制性活性。
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4
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5
CRISP-3, a protein with homology to plant defense proteins, is expressed in mouse B cells under the control of Oct2.CRISP-3是一种与植物防御蛋白具有同源性的蛋白质,在Oct2的控制下在小鼠B细胞中表达。
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6
Alternative splicing of the Oct-2 transcription factor RNA is differentially regulated in neuronal cells and B cells and results in protein isoforms with opposite effects on the activity of octamer/TAATGARAT-containing promoters.Oct-2转录因子RNA的可变剪接在神经元细胞和B细胞中受到不同调控,并产生对含八聚体/TAATGARAT启动子活性具有相反作用的蛋白质异构体。
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7
Differential transactivation potential of Oct1 and Oct2 is determined by additional B cell-specific activities.Oct1和Oct2的差异反式激活潜能由其他B细胞特异性活性决定。
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Characterization of an Oct1 orthologue in the channel catfish, Ictalurus punctatus: a negative regulator of immunoglobulin gene transcription?斑点叉尾鮰Oct1同源物的特性:免疫球蛋白基因转录的负调节因子?
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Characterization of chicken octamer-binding proteins demonstrates that POU domain-containing homeobox transcription factors have been highly conserved during vertebrate evolution.鸡八聚体结合蛋白的特性表明,含POU结构域的同源框转录因子在脊椎动物进化过程中一直高度保守。
Proc Natl Acad Sci U S A. 1990 Feb;87(3):1099-103. doi: 10.1073/pnas.87.3.1099.

引用本文的文献

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2
Oct-2 transcription factor binding activity and expression up-regulation in rat cerebral ischaemia is associated with a diminution of neuronal damage in vitro.Oct-2 转录因子结合活性和表达上调与体外神经元损伤减少有关。
Neuromolecular Med. 2014 Jun;16(2):332-49. doi: 10.1007/s12017-013-8279-1. Epub 2013 Nov 27.
3
Octamer-binding transcription factors: genomics and functions.

本文引用的文献

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Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei.从分离的哺乳动物细胞核的可溶性提取物中,RNA聚合酶II进行准确的转录起始。
Nucleic Acids Res. 1983 Mar 11;11(5):1475-89. doi: 10.1093/nar/11.5.1475.
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Two regulatory elements for immunoglobulin kappa light chain gene expression.免疫球蛋白κ轻链基因表达的两个调控元件。
Proc Natl Acad Sci U S A. 1984 Nov;81(22):7041-5. doi: 10.1073/pnas.81.22.7041.
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Structure of the 5' ends of immunoglobulin genes: a novel conserved sequence.免疫球蛋白基因5'端的结构:一种新的保守序列。
八聚体结合转录因子:基因组学与功能。
Front Biosci (Landmark Ed). 2013 Jun 1;18(3):1051-71. doi: 10.2741/4162.
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A high throughput embryonic stem cell screen identifies Oct-2 as a bifunctional regulator of neuronal differentiation.一项高通量胚胎干细胞筛选将Oct-2鉴定为神经元分化的双功能调节因子。
Genes Dev. 2009 Mar 1;23(5):575-88. doi: 10.1101/gad.1772509.
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A novel role for Oct-2 in the lipopolysaccharide-mediated induction of resistin gene expression in RAW264.7 cells.Oct-2在脂多糖介导的RAW264.7细胞抵抗素基因表达诱导中的新作用。
Biochem J. 2007 Mar 1;402(2):387-95. doi: 10.1042/BJ20061096.
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Btk expression is controlled by Oct and BOB.1/OBF.1.布鲁顿酪氨酸激酶(Btk)的表达受八聚体转录因子(Oct)和BOB.1/OBF.1调控。
Nucleic Acids Res. 2006 Mar 31;34(6):1807-15. doi: 10.1093/nar/gkl131. Print 2006.
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Oct-2 DNA binding transcription factor: functional consequences of phosphorylation and glycosylation.Oct-2 DNA结合转录因子:磷酸化和糖基化的功能后果
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Oct-2 regulates CD36 gene expression via a consensus octamer, which excludes the co-activator OBF-1.Oct-2通过一个共有八聚体调节CD36基因表达,该共有八聚体排除了共激活因子OBF-1。
Nucleic Acids Res. 2002 Apr 15;30(8):1767-73. doi: 10.1093/nar/30.8.1767.
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The different alternatively spliced isoforms of the Oct-2 transcription factor repress the involucrin promoter in a cell type-specific manner.Oct-2转录因子的不同可变剪接异构体以细胞类型特异性方式抑制外皮蛋白启动子。
Mol Biol Rep. 1998 Nov;25(4):253-7. doi: 10.1023/a:1006801002594.
10
Adjacent proline residues in the inhibitory domain of the Oct-2 transcription factor play distinct functional roles.Oct-2转录因子抑制结构域中的相邻脯氨酸残基发挥着不同的功能作用。
Nucleic Acids Res. 1998 May 15;26(10):2464-72. doi: 10.1093/nar/26.10.2464.
Proc Natl Acad Sci U S A. 1984 May;81(9):2650-4. doi: 10.1073/pnas.81.9.2650.
4
Correct transcription of an immunoglobulin kappa gene requires an upstream fragment containing conserved sequence elements.免疫球蛋白κ基因的正确转录需要一个包含保守序列元件的上游片段。
Nature. 1984;310(5972):71-4. doi: 10.1038/310071a0.
5
Cell-type specificity of immunoglobulin gene expression is regulated by at least three DNA sequence elements.免疫球蛋白基因表达的细胞类型特异性至少受三种DNA序列元件调控。
Cell. 1985 Jul;41(3):885-97. doi: 10.1016/s0092-8674(85)80069-6.
6
Transcription cell type specificity is conferred by an immunoglobulin VH gene promoter that includes a functional consensus sequence.转录细胞类型特异性由一个包含功能性共有序列的免疫球蛋白VH基因启动子赋予。
Cell. 1985 Jun;41(2):479-87. doi: 10.1016/s0092-8674(85)80021-0.
7
Nuclear factor III, a novel sequence-specific DNA-binding protein from HeLa cells stimulating adenovirus DNA replication.核因子III,一种来自HeLa细胞的新型序列特异性DNA结合蛋白,可刺激腺病毒DNA复制。
Nature. 1986;322(6080):656-9. doi: 10.1038/322656a0.
8
Purification and characterization of OTF-1, a transcription factor regulating cell cycle expression of a human histone H2b gene.OTF-1的纯化与特性分析,OTF-1是一种调控人类组蛋白H2b基因细胞周期表达的转录因子。
Cell. 1987 Dec 4;51(5):773-81. doi: 10.1016/0092-8674(87)90100-0.
9
A common octamer motif binding protein is involved in the transcription of U6 snRNA by RNA polymerase III and U2 snRNA by RNA polymerase II.一种常见的八聚体基序结合蛋白参与RNA聚合酶III对U6 snRNA的转录以及RNA聚合酶II对U2 snRNA的转录。
Cell. 1987 Oct 9;51(1):71-9. doi: 10.1016/0092-8674(87)90011-0.
10
An octamer oligonucleotide upstream of a TATA motif is sufficient for lymphoid-specific promoter activity.TATA基序上游的一个八聚体寡核苷酸足以产生淋巴细胞特异性启动子活性。
Nature. 1987;329(6135):174-8. doi: 10.1038/329174a0.