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用T4 RNA连接酶将寡脱氧核糖核苷酸连接到短、正常和长尺寸的共价连接的横截面碱基对类似物上。

Ligation with T4 RNA ligase of an oligodeoxyribonucleotide to covalently-linked cross-sectional base-pair analogues of short, normal, and long dimensions.

作者信息

Petric A, Bhat B, Leonard N J, Gumport R I

机构信息

Department of Chemistry and Chemical Technology, E. Kardelj University, Ljubljana, Yugoslavia.

出版信息

Nucleic Acids Res. 1991 Feb 11;19(3):585-90. doi: 10.1093/nar/19.3.585.

DOI:10.1093/nar/19.3.585
PMID:2011530
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC333652/
Abstract

Compounds that are covalent analogues of nucleic acid base pairs of normal, long, and short C1' to C1' dimensions [B. Devadas and N.J. Leonard (1990) J. Am. Chem. Soc., 112, 3125-3135.] have been added to the oligodeoxyribonucleotide d(A)6 with bacteriophage T4 RNA ligase as a prelude to placing them at defined loci within nucleic acid duplexes. Analogue cross sections that represent a normal Watson-Crick base pair as well as a pyrimidine-pyrimidine and a purine-purine apposition were ligated in modest yields (approximately 20%) to the oligonucleotide. Ligation conditions were optimized for each analogue, and the cross section was joined to only a single oligonucleotide in each case. The structures of the ligated products were proved by HPLC, enzymatic degradation, and spectroscopic analyses.

摘要

正常、长和短C1'至C1'尺寸的核酸碱基对的共价类似物[B. Devadas和N.J. Leonard(1990年)《美国化学会志》,112,3125 - 3135]已与噬菌体T4 RNA连接酶一起添加到寡脱氧核糖核苷酸d(A)6中,作为将它们置于核酸双链体内特定位点的前奏。代表正常沃森 - 克里克碱基对以及嘧啶 - 嘧啶和嘌呤 - 嘌呤并列的类似物横截面以适度的产率(约20%)连接到寡核苷酸上。针对每种类似物优化了连接条件,并且在每种情况下横截面仅与单个寡核苷酸连接。通过高效液相色谱、酶促降解和光谱分析证明了连接产物的结构。

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本文引用的文献

1
DNA sequence analysis: a general, simple and rapid method for sequencing large oligodeoxyribonucleotide fragments by mapping.DNA序列分析:一种通过图谱对大的寡脱氧核糖核苷酸片段进行测序的通用、简单且快速的方法。
Nucleic Acids Res. 1974 Mar;1(3):331-53. doi: 10.1093/nar/1.3.331.
2
The preparative synthesis of oligodeoxyribonucleotides using RNA ligase.使用RNA连接酶进行寡脱氧核糖核苷酸的制备合成。
Nucleic Acids Res. 1982 Mar 25;10(6):1877-94. doi: 10.1093/nar/10.6.1877.
3
T4 ribonucleic acid ligase joins single-strand oligo(deoxyribonucleotides).T4核糖核酸连接酶连接单链寡(脱氧核糖核苷酸)。
Biochemistry. 1980 Feb 19;19(4):635-42. doi: 10.1021/bi00545a005.
4
Polymer-stimulated ligation: enhanced blunt- or cohesive-end ligation of DNA or deoxyribooligonucleotides by T4 DNA ligase in polymer solutions.聚合物刺激连接:在聚合物溶液中,T4 DNA连接酶增强DNA或脱氧核糖寡核苷酸的平端或粘性末端连接。
Nucleic Acids Res. 1983 Nov 25;11(22):7853-71. doi: 10.1093/nar/11.22.7853.
5
Using T4 RNA ligase with DNA substrates.将T4 RNA连接酶用于DNA底物。
Methods Enzymol. 1983;100:38-52. doi: 10.1016/0076-6879(83)00044-0.
6
DNA-like duplexes with repetitions. III. Efficient template-guided chemical polymerization of d(TGGCCAAGCTp).具有重复序列的类DNA双链体。III. d(TGGCCAAGCTp)的高效模板导向化学聚合反应
Nucleic Acids Res. 1981 Nov 11;9(21):5747-61. doi: 10.1093/nar/9.21.5747.
7
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Nucleic Acids Symp Ser. 1980(7):167-71.
8
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