Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Yokosuka, Japan.
Environ Microbiol. 2010 May;12(5):1144-53. doi: 10.1111/j.1462-2920.2010.02155.x. Epub 2010 Feb 3.
The molecular components involved in energy metabolism of deep-sea Epsilonproteobacteria were characterized in the mesophilic hydrogen- and sulfur-oxidizing chemolithoautotroph Sulfurovum sp. NBC37-1. Previous whole-genome analysis of strain NBC37-1 identified key genes likely to be associated with both sulfur reduction (psr gene families) and oxidation (two sox gene clusters). However, the sox gene clusters showed unique organizations and low homologies to those in other bacteria. Therefore, the biochemical mechanism of inorganic sulfur metabolism has been uncertain. Enzymatic activity measurements and partial protein purification indicated that the Sox enzyme system was constitutively expressed, whereas the expression of sulfur-reduction enzymes varied depending on the culture conditions. The operative Sox system in strain NBC37-1 required membrane components. The molecular basis of energy metabolism reported in this study provides important insight into how deep-sea Epsilonproteobacteria change their energy metabolism in response to variable physical and chemical conditions in mixing zones between hydrothermal fluid and ambient seawater.
深海 ε 变形菌能量代谢所涉及的分子组成在中温型氢和硫氧化化能自养菌 Sulfurovum sp. NBC37-1 中得到了表征。先前对 NBC37-1 菌株的全基因组分析鉴定出了可能与硫还原(psr 基因家族)和氧化(两个 sox 基因簇)都相关的关键基因。然而,sox 基因簇表现出独特的组织和与其他细菌低的同源性。因此,无机硫代谢的生化机制尚不确定。酶活性测量和部分蛋白质纯化表明 Sox 酶系统是组成型表达的,而硫还原酶的表达则取决于培养条件。在 NBC37-1 菌株中,有效的 Sox 系统需要膜成分。本研究报道的能量代谢的分子基础为深海 ε 变形菌如何根据热液流体和周围海水混合区中可变的物理和化学条件改变其能量代谢提供了重要的见解。