Suppr超能文献

数学模型指导下的薄荷叶片精油成分和产量的生化、发育、环境和基因型决定因素的评估。

Mathematical modeling-guided evaluation of biochemical, developmental, environmental, and genotypic determinants of essential oil composition and yield in peppermint leaves.

机构信息

Institute of Biological Chemistry, School of Chemical Engineering and Bioengineering, Washington State University, Pullman, Washington 99164-6340, USA.

出版信息

Plant Physiol. 2010 Apr;152(4):2105-19. doi: 10.1104/pp.109.152256. Epub 2010 Feb 10.

Abstract

We have previously reported the use of a combination of computational simulations and targeted experiments to build a first generation mathematical model of peppermint (Menthaxpiperita) essential oil biosynthesis. Here, we report on the expansion of this approach to identify the key factors controlling monoterpenoid essential oil biosynthesis under adverse environmental conditions. We also investigated determinants of essential oil biosynthesis in transgenic peppermint lines with modulated essential oil profiles. A computational perturbation analysis, which was implemented to identify the variables that exert prominent control over the outputs of the model, indicated that the essential oil composition should be highly dependent on certain biosynthetic enzyme concentrations [(+)-pulegone reductase and (+)-menthofuran synthase], whereas oil yield should be particularly sensitive to the density and/or distribution of leaf glandular trichomes, the specialized anatomical structures responsible for the synthesis and storage of essential oils. A microscopic evaluation of leaf surfaces demonstrated that the final mature size of glandular trichomes was the same across all experiments. However, as predicted by the perturbation analysis, differences in the size distribution and the total number of glandular trichomes strongly correlated with differences in monoterpenoid essential oil yield. Building on various experimental data sets, appropriate mathematical functions were selected to approximate the dynamics of glandular trichome distribution/density and enzyme concentrations in our kinetic model. Based on a chi2 statistical analysis, simulated and measured essential oil profiles were in very good agreement, indicating that modeling is a valuable tool for guiding metabolic engineering efforts aimed at improving essential oil quality and quantity.

摘要

我们之前曾报道过使用计算模拟和靶向实验相结合的方法来构建薄荷(Mentha x piperita)精油生物合成的第一代数学模型。在这里,我们报告了这一方法的扩展,以确定在不利环境条件下控制单萜类精油生物合成的关键因素。我们还研究了通过调节精油特征的转基因薄荷系中精油生物合成的决定因素。实施计算扰动分析以确定对模型输出施加显著控制的变量表明,精油组成应该高度依赖于某些生物合成酶浓度[(+)-薄荷酮还原酶和(+)-薄荷呋喃合酶],而油产量应该特别敏感于叶腺毛密度和/或分布,这些特殊的解剖结构负责精油的合成和储存。对叶片表面的微观评估表明,所有实验中腺毛的最终成熟大小是相同的。然而,正如扰动分析所预测的那样,腺毛大小分布和总数的差异与单萜类精油产量的差异强烈相关。基于各种实验数据集,选择了适当的数学函数来近似我们动力学模型中腺毛分布/密度和酶浓度的动态。基于卡方统计分析,模拟和测量的精油特征非常吻合,表明建模是指导旨在提高精油质量和数量的代谢工程努力的有价值的工具。

相似文献

6
Improving peppermint essential oil yield and composition by metabolic engineering.通过代谢工程提高薄荷精油产量和组成。
Proc Natl Acad Sci U S A. 2011 Oct 11;108(41):16944-9. doi: 10.1073/pnas.1111558108. Epub 2011 Sep 30.

引用本文的文献

4
Genetic Manipulation of Biosynthetic Pathways in Mint.薄荷生物合成途径的基因操作
Front Plant Sci. 2022 Jun 14;13:928178. doi: 10.3389/fpls.2022.928178. eCollection 2022.

本文引用的文献

4
Approaches to biosimulation of cellular processes.细胞过程的生物模拟方法。
J Biol Phys. 2006 Oct;32(3-4):273-88. doi: 10.1007/s10867-006-9016-x. Epub 2006 Nov 11.
7
Stochastic dynamics of genetic networks: modelling and parameter identification.基因网络的随机动力学:建模与参数识别
Bioinformatics. 2008 Dec 1;24(23):2748-54. doi: 10.1093/bioinformatics/btn527. Epub 2008 Oct 9.
8
Stoichiometric modelling of cell metabolism.细胞代谢的化学计量学建模
J Biosci Bioeng. 2008 Jan;105(1):1-11. doi: 10.1263/jbb.105.1.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验