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应用特异引物和探针的 TaqMan 荧光定量 RT-PCR 检测鸭疱疹病毒 1 gC 基因

Detection of anatid herpesvirus 1 gC gene by TaqMan fluorescent quantitative real-time PCR with specific primers and probe.

机构信息

Avian Disease Research Center, College of Veterinary Medicine, Sichuan Agricultural University, Yaan 625014, China.

出版信息

Virol J. 2010 Feb 13;7:37. doi: 10.1186/1743-422X-7-37.

DOI:10.1186/1743-422X-7-37
PMID:20152046
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2837632/
Abstract

BACKGROUND

Anatid herpesvirus 1 (AHV-1) is known for the difficulty of monitoring and controlling, because it has a long period of asymptomatic carrier state in waterfowls. Furthermore, as a significant essential agent for viral attachment, release, stability and virulence, gC (UL44) gene and its protein product (glycoprotein C) may play a key role in the epidemiological screening. The objectives of this study were to rapidly, sensitively, quantitatively detect gC gene of AHV-1 and provide the underlying basis for further investigating pcDNA3.1-gC DNA vaccine in infected ducks by TaqMan fluorescent quantitative real-time PCR assay (FQ-PCR) with pcDNA3.1-gC plasmid.

RESULTS

The repeatable and reproducible quantitative assay was established by the standard curve with a wide dynamic range (eight logarithmic units of concentration) and very good correlation values (1.000). This protocol was able to detect as little as 1.0 x 101 DNA copies per reaction and it was highly specific to AHV-1. The TaqMan FQ-PCR assay successfully detected the gC gene in tissue samples from pcDNA3.1-gC and AHV-1 attenuated vaccine (AHV-1 Cha) strain inoculated ducks respectively.

CONCLUSIONS

The assay offers an attractive method for the detection of AHV-1, the investigation of distribution pattern of AHV-1 in vivo and molecular epidemiological screening. Meanwhile, this method could expedite related AHV-1 and gC DNA vaccine research.

摘要

背景

鸭疱疹病毒 1 型(AHV-1)由于在水禽中存在较长时间的无症状携带状态,因此难以监测和控制。此外,作为病毒附着、释放、稳定和毒力的重要必需因子,gC(UL44)基因及其蛋白产物(糖蛋白 C)可能在流行病学筛查中发挥关键作用。本研究的目的是快速、敏感、定量检测 AHV-1 的 gC 基因,并通过 TaqMan 荧光定量实时 PCR 检测(FQ-PCR)pcDNA3.1-gC 质粒,为进一步研究感染鸭中的 pcDNA3.1-gC DNA 疫苗提供基础。

结果

通过标准曲线建立了可重复和可重现的定量检测方法,该标准曲线具有宽动态范围(八个对数单位的浓度)和非常好的相关值(1.000)。该方案能够检测到每个反应低至 1.0 x 101 DNA 拷贝,并且对 AHV-1 具有高度特异性。TaqMan FQ-PCR 检测成功地检测了 pcDNA3.1-gC 和 AHV-1 减毒疫苗(AHV-1 Cha)株接种鸭组织样本中的 gC 基因。

结论

该检测方法为 AHV-1 的检测、体内 AHV-1 分布模式的研究和分子流行病学筛查提供了一种有吸引力的方法。同时,该方法可以加快相关 AHV-1 和 gC DNA 疫苗的研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3603/2837632/90a547925c99/1743-422X-7-37-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3603/2837632/df20e76276cd/1743-422X-7-37-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3603/2837632/67246c44d2b4/1743-422X-7-37-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3603/2837632/90a547925c99/1743-422X-7-37-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3603/2837632/df20e76276cd/1743-422X-7-37-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3603/2837632/67246c44d2b4/1743-422X-7-37-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3603/2837632/90a547925c99/1743-422X-7-37-3.jpg

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