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芳基胺合成酶、氨基脱氧胆色素合酶、异分支酸合酶和水杨酸合酶中的亲核体特异性。

Nucleophile specificity in anthranilate synthase, aminodeoxychorismate synthase, isochorismate synthase, and salicylate synthase.

机构信息

Department of Chemistry, University of California, Davis, California 95616, USA.

出版信息

Biochemistry. 2010 Apr 6;49(13):2851-9. doi: 10.1021/bi100021x.

Abstract

Anthranilate synthase (AS), aminodeoxychorismate synthase (ADCS), isochorismate synthase (IS), and salicylate synthase (SS) are structurally homologous chorismate-utilizing enzymes that carry out the first committed step in the formation of tryptophan, folate, and the siderophores enterobactin and mycobactin, respectively. Each enzyme catalyzes a nucleophilic substitution reaction, but IS and SS are uniquely able to employ water as a nucleophile. Lys147 has been proposed to be the catalytic base that activates water for nucleophilic attack in IS and SS reactions; in AS and ADCS, glutamine occupies the analogous position. To probe the role of Lys147 as a catalytic base, the K147Q IS, K147Q SS, Q147K AS, and Q147K ADCS mutants were prepared and enzyme reactions were analyzed by high-performance liquid chromatography. Q147K AS employs water as a nucleophile to a small extent, and the cognate activities of K147Q IS and K147Q SS were reduced approximately 25- and approximately 50-fold, respectively. Therefore, Lys147 is not solely responsible for activation of water as a nucleophile. Additional factors that contribute to water activation are proposed. A change in substrate preference for K147Q SS pyruvate lyase activity indicates Lys147 partially controls SS reaction specificity. Finally, we demonstrate that AS, ADCS, IS, and SS do not possess chorismate mutase promiscuous activity, contrary to several previous reports.

摘要

色氨酸合酶 (AS)、氨基脱氧胆色素合酶 (ADCS)、异分支酸合酶 (IS) 和水杨酸合酶 (SS) 是结构同源的分支酸利用酶,分别催化色氨酸、叶酸和铁载体依波依定和麦科宾的生物合成中的第一个关键步骤。这些酶都催化亲核取代反应,但 IS 和 SS 能够独特地利用水作为亲核试剂。赖氨酸 147 被提议为激活 IS 和 SS 反应中水的亲核攻击的催化碱;在 AS 和 ADCS 中,谷氨酰胺占据类似的位置。为了探究赖氨酸 147 作为催化碱的作用,制备了 K147Q IS、K147Q SS、Q147K AS 和 Q147K ADCS 突变体,并通过高效液相色谱法分析酶反应。Q147K AS 以较小的程度利用水作为亲核试剂,而 K147Q IS 和 K147Q SS 的相应活性分别降低了约 25 倍和约 50 倍。因此,赖氨酸 147 并不是激活水作为亲核试剂的唯一因素。提出了其他有助于水激活的因素。K147Q SS 丙酮酸裂解酶活性的底物偏好性变化表明,赖氨酸 147 部分控制 SS 反应特异性。最后,我们证明 AS、ADCS、IS 和 SS 不具有分支酸变位酶的混杂活性,与之前的一些报道相反。

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