Department of Molecular Biosciences, University of Kansas, Lawrence, Kansas 66045, United States.
Biochemistry. 2011 Sep 6;50(35):7476-83. doi: 10.1021/bi2009739. Epub 2011 Aug 12.
One of the fundamental questions of enzymology is how catalytic power is derived. This review focuses on recent developments in the structure--function relationships of chorismate-utilizing enzymes involved in siderophore biosynthesis to provide insight into the biocatalysis of pericyclic reactions. Specifically, salicylate synthesis by the two-enzyme pathway in Pseudomonas aeruginosa is examined. The isochorismate-pyruvate lyase is discussed in the context of its homologues, the chorismate mutases, and the isochorismate synthase is compared to its homologues in the MST family (menaquinone, siderophore, or tryptophan biosynthesis) of enzymes. The tentative conclusion is that the activities observed cannot be reconciled by inspection of the active site participants alone. Instead, individual activities must arise from unique dynamic properties of each enzyme that are tuned to promote specific chemistries.
酶学的一个基本问题是如何产生催化能力。本篇综述聚焦于参与铁载体生物合成的分支酸利用酶的结构-功能关系的最新进展,以期深入了解周环反应的生物催化。具体来说,我们考察了铜绿假单胞菌中两种酶途径的水杨酸合成。讨论了异分支酸-丙酮酸裂解酶与其同源物分支酸变位酶的关系,并将异分支酸合酶与其在 MST 家族(menaquinone、siderophore 或 tryptophan biosynthesis)中的同源物进行了比较。我们的初步结论是,仅通过检查活性位点参与者,就无法解释观察到的活性。相反,单个活性必须来自于每个酶的独特动态特性,这些特性被调整以促进特定的化学。