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正则化生物发光断层成像的差分进化算法。

Differential evolution approach for regularized bioluminescence tomography.

机构信息

Department of Electrical and Computer Engineering,Virginia Polytechnic Institute and State University, Blacksburg, VA 24060, USA.

出版信息

IEEE Trans Biomed Eng. 2010 Sep;57(9):2229-38. doi: 10.1109/TBME.2010.2041452. Epub 2010 Feb 17.

DOI:10.1109/TBME.2010.2041452
PMID:20172778
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3121330/
Abstract

Bioluminescence tomography (BLT) is an inverse source problem that localizes and quantifies bioluminescent probe distribution in 3-D. The generic BLT model is ill-posed, leading to nonunique solutions and aberrant reconstruction in the presence of measurement noise and optical parameter mismatches. In this paper, we introduce the knowledge of the number of bioluminescence sources to stabilize the BLT problem. Based on this regularized BLT model, we develop a differential evolution-based reconstruction algorithm to determine the source locations and strengths accurately and reliably. Then, we evaluate this novel approach in numerical, phantom, and mouse studies.

摘要

生物发光断层成像(BLT)是一种反源问题,可在 3D 中定位和量化生物发光探针的分布。通用的 BLT 模型不适定,导致在存在测量噪声和光学参数不匹配的情况下出现非唯一解和异常重建。在本文中,我们引入了生物发光源数量的知识来稳定 BLT 问题。基于这个正则化的 BLT 模型,我们开发了一种基于差分进化的重建算法,以准确可靠地确定源的位置和强度。然后,我们在数值、体模和小鼠研究中评估了这种新方法。

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Differential evolution approach for regularized bioluminescence tomography.正则化生物发光断层成像的差分进化算法。
IEEE Trans Biomed Eng. 2010 Sep;57(9):2229-38. doi: 10.1109/TBME.2010.2041452. Epub 2010 Feb 17.
2
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A gantry-based tri-modality system for bioluminescence tomography.一种基于龙门架的用于生物发光断层扫描的三模态系统。

本文引用的文献

1
The first bioluminescence tomography system for simultaneous acquisition of multiview and multispectral data.首个用于同时采集多视图和多光谱数据的生物发光断层扫描系统。
Int J Biomed Imaging. 2006;2006:58601. doi: 10.1155/IJBI/2006/58601. Epub 2006 Dec 4.
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Multispectral bioluminescence tomography: methodology and simulation.多光谱生物发光断层扫描:方法与模拟
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Image reconstruction for bioluminescence tomography from partial measurement.基于部分测量的生物发光断层成像的图像重建
Rev Sci Instrum. 2012 Apr;83(4):043708. doi: 10.1063/1.3698295.
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A finite element mesh aggregating approach to multiple-source reconstruction in bioluminescence tomography.生物发光断层成像中多源重建的有限元网格聚合方法
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A multilevel adaptive finite element algorithm for bioluminescence tomography.一种用于生物发光断层成像的多级自适应有限元算法。
Opt Express. 2006 Sep 4;14(18):8211-23. doi: 10.1364/oe.14.008211.
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In vivo mouse studies with bioluminescence tomography.利用生物发光断层扫描技术进行的小鼠体内研究。
Opt Express. 2006 Aug 21;14(17):7801-9. doi: 10.1364/oe.14.007801.
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Practical reconstruction method for bioluminescence tomography.生物发光断层成像的实用重建方法。
Opt Express. 2005 Sep 5;13(18):6756-71. doi: 10.1364/opex.13.006756.
7
Three-dimensional simulation of near-infrared diffusion in tissue: boundary condition and geometry analysis for finite-element image reconstruction.组织中近红外扩散的三维模拟:有限元图像重建的边界条件和几何分析
Appl Opt. 2001 Feb 1;40(4):588-600. doi: 10.1364/ao.40.000588.
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Three-dimensional reconstruction of in vivo bioluminescent sources based on multispectral imaging.基于多光谱成像的体内生物发光源三维重建
J Biomed Opt. 2007 Mar-Apr;12(2):024007. doi: 10.1117/1.2717898.
9
Tomographic bioluminescence imaging with varying boundary conditions.具有不同边界条件的断层生物发光成像。
Appl Opt. 2007 May 10;46(14):2778-84. doi: 10.1364/ao.46.002778.
10
Effect of optical property estimation accuracy on tomographic bioluminescence imaging: simulation of a combined optical-PET (OPET) system.光学特性估计精度对断层生物发光成像的影响:光学正电子发射断层扫描(OPET)组合系统的模拟
Phys Med Biol. 2006 Apr 21;51(8):2045-53. doi: 10.1088/0031-9155/51/8/006. Epub 2006 Apr 3.