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Substrate activation for O2 reactions by oxidized metal centers in biology.生物学中氧化金属中心对O2反应的底物激活作用。
Proc Natl Acad Sci U S A. 2007 Nov 20;104(47):18355-62. doi: 10.1073/pnas.0704191104. Epub 2007 Nov 14.
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DFT study of the systematic variations in metal-ligand bond lengths of coordination complexes: the crucial role of the condensed phase.配位化合物中金属-配体键长系统变化的密度泛函理论研究:凝聚相的关键作用
Inorg Chem. 2007 Oct 1;46(20):8238-44. doi: 10.1021/ic701166p. Epub 2007 Sep 1.
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Spectroscopic and electronic structure study of the enzyme-substrate complex of intradiol dioxygenases: substrate activation by a high-spin ferric non-heme iron site.间二醇双加氧酶酶-底物复合物的光谱和电子结构研究:高自旋三价非血红素铁位点对底物的激活作用
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Fe L-edge XAS studies of K4[Fe(CN)6] and K3[Fe(CN)6]: a direct probe of back-bonding.K4[Fe(CN)6] 和 K3[Fe(CN)6] 的铁 L 边 X 射线吸收光谱研究:反馈键合的直接探测
J Am Chem Soc. 2006 Aug 16;128(32):10442-51. doi: 10.1021/ja061802i.
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X-ray absorption edge spectroscopy and computational studies on LCuO2 species: Superoxide-Cu(II) versus peroxide-Cu(III) bonding.关于LCuO₂物种的X射线吸收边光谱及计算研究:超氧化物-Cu(II)与过氧化物-Cu(III)键合
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Spectroscopic and DFT investigation of [M{HB(3,5-iPr2pz)3}(SC6F5)] (M = Mn, Fe, Co, Ni, Cu, and Zn) model complexes: periodic trends in metal-thiolate bonding.[M{HB(3,5-二异丙基吡唑)3}(SC6F5)](M = 锰、铁、钴、镍、铜和锌)模型配合物的光谱和密度泛函理论研究:金属硫醇盐键合的周期性趋势
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L-edge X-ray absorption spectroscopy of non-heme iron sites: experimental determination of differential orbital covalency.非血红素铁位点的L边X射线吸收光谱:轨道共价差异的实验测定
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Enterobactin: an archetype for microbial iron transport.肠杆菌素:微生物铁转运的原型。
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10
Electrochemical Behavior of the Fe(III) Complexes of the Cyclic Hydroxamate Siderophores Alcaligin and Desferrioxamine E.环状异羟肟酸铁载体阿尔卡吉宁和去铁胺E的铁(III)配合物的电化学行为
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基于 Fe L 边 X 射线吸收谱对铁载体模型化合物的轨道共价性差异的测定:对高稳定常数的电子结构贡献。

Fe L-edge X-ray absorption spectroscopy determination of differential orbital covalency of siderophore model compounds: electronic structure contributions to high stability constants.

机构信息

Department of Chemistry, Stanford University, Stanford, California 94305, USA.

出版信息

J Am Chem Soc. 2010 Mar 24;132(11):4006-15. doi: 10.1021/ja9090098.

DOI:10.1021/ja9090098
PMID:20187651
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2890247/
Abstract

Most bacteria and fungi produce low-molecular-weight iron chelators called siderophores. Although different siderophore structures have been characterized, the iron-binding moieties often contain catecholate or hydroxamate groups. Siderophores function because of their extraordinarily high stability constants (K(STAB) = 10(30)-10(49)) and selectivity for Fe(III), yet the origin of these high stability constants has been difficult to quantify experimentally. Herein, we utilize Fe L-edge X-ray absorption spectroscopy to determine the differential orbital covalency (i.e., the differences in the mixing of the metal d-orbitals with ligand valence orbitals) of a series of siderophore model compounds. The results enable evaluation of the electronic structure contributions to their high stability constants in terms of sigma- and pi-donor covalent bonding, ionic bonding, and solvent effects. The results indicate substantial differences in the covalent contributions to stability constants of hydroxamate and catecholate complexes and show that increased sigma as well as pi bonding contributes to the high stability constants of catecholate complexes.

摘要

大多数细菌和真菌会产生称为铁载体的低分子量铁螯合剂。虽然已经对不同的铁载体结构进行了表征,但铁结合部分通常含有儿茶酚或羟肟酸基团。铁载体之所以具有功能,是因为它们具有极高的稳定常数(K(STAB) = 10(30)-10(49))和对 Fe(III)的选择性,但这些高稳定常数的起源很难通过实验进行量化。在此,我们利用 Fe L 边 X 射线吸收光谱来确定一系列铁载体模型化合物的差分轨道共价性(即金属 d 轨道与配体价轨道混合的差异)。结果可根据 sigma- 和 pi-供体共价键合、离子键合和溶剂效应来评估对其高稳定常数的电子结构贡献。结果表明,羟肟酸和儿茶酚配合物的稳定常数的共价贡献存在显著差异,并且表明增加的 sigma 以及 pi 键合有助于儿茶酚配合物的高稳定常数。