• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

利用位点特异性重组酶和荧光蛋白载体进行染色体操作。

Chromosomal manipulation by site-specific recombinases and fluorescent protein-based vectors.

机构信息

Evolutionary Medicine, Shiga Medical Center Research Institute, Moriyama, Japan.

出版信息

PLoS One. 2010 Mar 24;5(3):e9846. doi: 10.1371/journal.pone.0009846.

DOI:10.1371/journal.pone.0009846
PMID:20352097
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2844420/
Abstract

Feasibility of chromosomal manipulation in mammalian cells was first reported 15 years ago. Although this technique is useful for precise understanding of gene regulation in the chromosomal context, a limited number of laboratories have used it in actual practice because of associated technical difficulties. To overcome the practical hurdles, we developed a Cre-mediated chromosomal recombination system using fluorescent proteins and various site-specific recombinases. These techniques enabled quick construction of targeting vectors, easy identification of chromosome-rearranged cells, and rearrangement leaving minimum artificial elements at junctions. Applying this system to a human cell line, we successfully recapitulated two types of pathogenic chromosomal translocations in human diseases: MYC/IgH and BCR/ABL1. By inducing recombination between two loxP sites targeted into the same chromosome, we could mark cells harboring deletion or duplication of the inter-loxP segments with different colors of fluorescence. In addition, we demonstrated that the intrachromosomal recombination frequency is inversely proportional to the distance between two recombination sites, implicating a future application of this frequency as a proximity sensor. Our method of chromosomal manipulation can be employed for particular cell types in which gene targeting is possible (e.g. embryonic stem cells). Experimental use of this system would open up new horizons in genome biology, including the establishment of cellular and animal models of diseases caused by translocations and copy-number variations.

摘要

15 年前首次报道了在哺乳动物细胞中进行染色体操作的可行性。尽管该技术对于在染色体背景下精确理解基因调控非常有用,但由于相关技术困难,只有少数实验室在实际中使用它。为了克服实际障碍,我们使用荧光蛋白和各种位点特异性重组酶开发了一种 Cre 介导的染色体重组系统。这些技术使靶向载体的快速构建、染色体重排细胞的易于鉴定以及在连接点处留下最小的人工元件的重排成为可能。将该系统应用于人类细胞系,我们成功地在人类疾病中重现了两种致病性染色体易位:MYC/IgH 和 BCR/ABL1。通过诱导靶向同一染色体的两个 loxP 位点之间的重组,我们可以用不同颜色的荧光标记携带有 loxP 片段缺失或重复的细胞。此外,我们证明了两个重组位点之间的重组频率与距离成反比,这暗示了该频率可作为一种接近传感器的未来应用。我们的染色体操作方法可用于基因靶向可能的特定细胞类型(例如胚胎干细胞)。该系统的实验应用将为基因组生物学开辟新的视野,包括建立由易位和拷贝数变异引起的疾病的细胞和动物模型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/06912df41776/pone.0009846.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/3ecc8191288d/pone.0009846.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/d70a9d558945/pone.0009846.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/941e9c87e6d1/pone.0009846.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/bb5faa9d249e/pone.0009846.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/8ba8cab03442/pone.0009846.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/002d5670e11c/pone.0009846.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/00fe8d1d78c1/pone.0009846.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/06912df41776/pone.0009846.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/3ecc8191288d/pone.0009846.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/d70a9d558945/pone.0009846.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/941e9c87e6d1/pone.0009846.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/bb5faa9d249e/pone.0009846.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/8ba8cab03442/pone.0009846.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/002d5670e11c/pone.0009846.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/00fe8d1d78c1/pone.0009846.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ddfa/2844420/06912df41776/pone.0009846.g008.jpg

相似文献

1
Chromosomal manipulation by site-specific recombinases and fluorescent protein-based vectors.利用位点特异性重组酶和荧光蛋白载体进行染色体操作。
PLoS One. 2010 Mar 24;5(3):e9846. doi: 10.1371/journal.pone.0009846.
2
Cre-mediated site-specific translocation between nonhomologous mouse chromosomes.Cre介导的非同源小鼠染色体间位点特异性易位。
Proc Natl Acad Sci U S A. 1995 Aug 1;92(16):7376-80. doi: 10.1073/pnas.92.16.7376.
3
Mammalian genome targeting using site-specific recombinases.使用位点特异性重组酶进行哺乳动物基因组靶向
Front Biosci. 2006 Jan 1;11:1108-36. doi: 10.2741/1867.
4
A site-directed chromosomal translocation induced in embryonic stem cells by Cre-loxP recombination.通过Cre-loxP重组在胚胎干细胞中诱导产生的位点特异性染色体易位。
Nat Genet. 1995 Apr;9(4):376-85. doi: 10.1038/ng0495-376.
5
Engineering chromosomal rearrangements in mice.在小鼠中构建染色体重排
Nat Rev Genet. 2001 Oct;2(10):780-90. doi: 10.1038/35093564.
6
Rapid induction of large chromosomal deletions by a Cre/inverted loxP system in mouse ES Cell hybrids.利用Cre/反向loxP系统在小鼠胚胎干细胞杂交细胞中快速诱导大染色体缺失
J Mol Biol. 2008 Apr 25;378(2):328-36. doi: 10.1016/j.jmb.2008.01.065. Epub 2008 Feb 2.
7
Target chromosomes of inducible deletion by a Cre/inverted loxP system in mouse embryonic stem cells.
Chromosome Res. 2009;17(4):443-50. doi: 10.1007/s10577-009-9035-0. Epub 2009 Mar 31.
8
Targeted insertion of exogenous DNA into the eukaryotic genome by the Cre recombinase.通过Cre重组酶将外源DNA靶向插入真核基因组。
New Biol. 1990 May;2(5):441-9.
9
High frequency recombination between loxP sites in human chromosomes mediated by an adenovirus vector expressing Cre recombinase.由表达Cre重组酶的腺病毒载体介导的人类染色体中loxP位点间的高频重组。
Somat Cell Mol Genet. 1995 Nov;21(6):429-41. doi: 10.1007/BF02310209.
10
Transgene manipulation in zebrafish by using recombinases.利用重组酶对斑马鱼进行转基因操作。
Methods Cell Biol. 2004;77:363-79. doi: 10.1016/s0091-679x(04)77020-x.

引用本文的文献

1
A heterodimer of evolved designer-recombinases precisely excises a human genomic DNA locus.一种进化设计重组酶的异二聚体精确切除人类基因组 DNA 基因座。
Nucleic Acids Res. 2020 Jan 10;48(1):472-485. doi: 10.1093/nar/gkz1078.
2
Multiple expression cassette exchange via TP901-1, R4, and Bxb1 integrase systems on a mouse artificial chromosome.通过TP901-1、R4和Bxb1整合酶系统在小鼠人工染色体上进行多表达盒交换
FEBS Open Bio. 2017 Jan 28;7(3):306-317. doi: 10.1002/2211-5463.12169. eCollection 2017 Mar.
3
Conditional gene manipulation: Cre-ating a new biological era.

本文引用的文献

1
Comprehensive mapping of long-range interactions reveals folding principles of the human genome.远距离相互作用的全面图谱揭示了人类基因组的折叠原理。
Science. 2009 Oct 9;326(5950):289-93. doi: 10.1126/science.1181369.
2
Manipulating the mouse genome to engineer precise functional syntenic replacements with human sequence.操纵小鼠基因组以构建具有人类序列的精确功能性同线性替代物。
Cell. 2007 Jan 12;128(1):197-209. doi: 10.1016/j.cell.2006.11.044.
3
Simple one-week method to construct gene-targeting vectors: application to production of human knockout cell lines.
条件性基因操作:开创生物学新纪元。
J Zhejiang Univ Sci B. 2012 Jul;13(7):511-24. doi: 10.1631/jzus.B1200042.
4
Recombinase technology: applications and possibilities.重组酶技术:应用与可能性。
Plant Cell Rep. 2011 Mar;30(3):267-85. doi: 10.1007/s00299-010-0938-1. Epub 2010 Oct 24.
构建基因靶向载体的简单一周方法:应用于人类基因敲除细胞系的生产
Biotechniques. 2006 Sep;41(3):311-6. doi: 10.2144/000112233.
4
The human pre-B cell line Nalm-6 is highly proficient in gene targeting by homologous recombination.人前B细胞系Nalm-6通过同源重组进行基因靶向的能力很强。
DNA Cell Biol. 2006 Jan;25(1):19-24. doi: 10.1089/dna.2006.25.19.
5
Mosaic analysis with double markers in mice.小鼠双标记镶嵌分析。
Cell. 2005 May 6;121(3):479-92. doi: 10.1016/j.cell.2005.02.012.
6
Cre-loxP chromosome engineering of a targeted deletion in the mouse corresponding to the 3p21.3 region of homozygous loss in human tumours.对小鼠进行Cre-loxP染色体工程改造,以实现与人类肿瘤中纯合缺失的3p21.3区域相对应的靶向缺失。
Oncogene. 2002 Jul 4;21(29):4521-9. doi: 10.1038/sj.onc.1205530.
7
A monomeric red fluorescent protein.一种单体红色荧光蛋白。
Proc Natl Acad Sci U S A. 2002 Jun 11;99(12):7877-82. doi: 10.1073/pnas.082243699.
8
DNA cloning using in vitro site-specific recombination.利用体外位点特异性重组进行DNA克隆。
Genome Res. 2000 Nov;10(11):1788-95. doi: 10.1101/gr.143000.
9
Nested chromosomal deletions induced with retroviral vectors in mice.逆转录病毒载体在小鼠中诱导的嵌套染色体缺失
Nat Genet. 2000 Jan;24(1):92-5. doi: 10.1038/71756.
10
Engineering mouse chromosomes with Cre-loxP: range, efficiency, and somatic applications.利用Cre-loxP技术构建小鼠染色体:范围、效率及体细胞应用
Mol Cell Biol. 2000 Jan;20(2):648-55. doi: 10.1128/MCB.20.2.648-655.2000.