State Key Laboratories for Agrobiotechnology/College of Biological Sciences, China Agricultural University, Beijing, 100193, PR China.
Departamento de Microbiología, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, 11340 México D. F., México.
Int J Syst Evol Microbiol. 2011 Mar;61(Pt 3):580-586. doi: 10.1099/ijs.0.023143-0. Epub 2010 Apr 9.
A group of rhizobial strains isolated from nodules of multiple legume species grown in different geographical regions of China had identical 16S rRNA genes. Phylogenetic analysis based on the 16S rRNA gene sequences showed that the novel strains formed a subclade in the genus Rhizobium together with Rhizobium galegae, Rhizobium huautlense and Rhizobium alkalisoli, with 99.8 % gene sequence similarity between the strains. The DNA-DNA relatedness values between the representative strain CCBAU 05176(T) and R. galegae ATCC 43677(T), R. huautlense S02(T) and R. alkalisoli CCBAU 01393(T) were 22.6 %, 8.9 % and 15.9 %, respectively. The novel strains were distinguished from recognized species of the genus Rhizobium by using a polyphasic approach, including PCR-based restriction fragment length polymorphism analysis (RFLP) of the 16S-23S intergenic spacer (IGS), phenotypic and physiological tests, sequence comparisons of housekeeping genes and cellular fatty acid profiles. Therefore, it is suggested that this group of strains represents a novel species for which the name Rhizobium vignae sp. nov. is proposed. The type strain is CCBAU 05176(T) (=HAMBI 3039(T)=LMG 25447(T)).
从中国不同地理区域生长的多种豆科植物根瘤中分离出的一组根瘤菌菌株具有相同的 16S rRNA 基因。基于 16S rRNA 基因序列的系统发育分析表明,这些新菌株与 Rhizobium galegae、Rhizobium huautlense 和 Rhizobium alkalisoli 一起形成了 Rhizobium 属的一个亚群,菌株之间的基因序列相似度为 99.8%。代表菌株 CCBAU 05176(T)与 R. galegae ATCC 43677(T)、R. huautlense S02(T)和 R. alkalisoli CCBAU 01393(T)之间的 DNA-DNA 相关性值分别为 22.6%、8.9%和 15.9%。通过多相方法,包括基于 PCR 的 16S-23S 间隔区(IGS)的限制性片段长度多态性分析(RFLP)、表型和生理测试、看家基因序列比较和细胞脂肪酸图谱,将这些新菌株与 Rhizobium 属的公认种区分开来。因此,建议将这组菌株代表一个新种,命名为 Rhizobium vignae sp. nov.。其模式菌株为 CCBAU 05176(T)(=HAMBI 3039(T)=LMG 25447(T))。