Dodd Dylan, Cann Isaac K O
Department of Microbiology, University of Illinois, Urbana, IL 61801, USA.
Glob Change Biol Bioenergy. 2009 Feb 18;1(1):2-17. doi: 10.1111/j.1757-1707.2009.01004.x.
The combustion of fossil-derived fuels has a significant impact on atmospheric carbon dioxide (CO(2)) levels and correspondingly is an important contributor to anthropogenic global climate change. Plants have evolved photosynthetic mechanisms in which solar energy is used to fix CO(2) into carbohydrates. Thus, combustion of biofuels, derived from plant biomass, can be considered a potentially carbon neutral process. One of the major limitations for efficient conversion of plant biomass to biofuels is the recalcitrant nature of the plant cell wall, which is composed mostly of lignocellulosic materials (lignin, cellulose, and hemicellulose). The heteropolymer xylan represents the most abundant hemicellulosic polysaccharide and is composed primarily of xylose, arabinose, and glucuronic acid. Microbes have evolved a plethora of enzymatic strategies for hydrolyzing xylan into its constituent sugars for subsequent fermentation to biofuels. Therefore, microorganisms are considered an important source of biocatalysts in the emerging biofuel industry. To produce an optimized enzymatic cocktail for xylan deconstruction, it will be valuable to gain insight at the molecular level of the chemical linkages and the mechanisms by which these enzymes recognize their substrates and catalyze their reactions. Recent advances in genomics, proteomics, and structural biology have revolutionized our understanding of the microbial xylanolytic enzymes. This review focuses on current understanding of the molecular basis for substrate specificity and catalysis by enzymes involved in xylan deconstruction.
化石衍生燃料的燃烧对大气二氧化碳(CO₂)水平有重大影响,相应地也是人为全球气候变化的重要促成因素。植物进化出了光合作用机制,利用太阳能将CO₂固定为碳水化合物。因此,源自植物生物质的生物燃料燃烧可被视为潜在的碳中性过程。将植物生物质高效转化为生物燃料的主要限制之一是植物细胞壁的顽固性,其主要由木质纤维素材料(木质素、纤维素和半纤维素)组成。杂聚物木聚糖是最丰富的半纤维素多糖,主要由木糖、阿拉伯糖和葡萄糖醛酸组成。微生物进化出了大量的酶促策略,用于将木聚糖水解成其组成糖类,以便随后发酵成生物燃料。因此,微生物被认为是新兴生物燃料产业中生物催化剂的重要来源。为了生产用于木聚糖解构的优化酶混合物,在分子水平上深入了解化学连接以及这些酶识别其底物并催化其反应的机制将是很有价值的。基因组学、蛋白质组学和结构生物学的最新进展彻底改变了我们对微生物木聚糖分解酶的理解。本综述重点关注目前对参与木聚糖解构的酶的底物特异性和催化作用的分子基础的理解。