Fuller Danny, Chen Wen, Adler Micha, Groisman Alex, Levine Herbert, Rappel Wouter-Jan, Loomis William F
Cell and Developmental Biology, Division of Biological Sciences, Department of Physics, and Center for Theoretical Biological Physics, University of California, La Jolla, CA 92093, USA.
Proc Natl Acad Sci U S A. 2010 May 25;107(21):9656-9. doi: 10.1073/pnas.0911178107. Epub 2010 May 10.
Chemotaxis, the chemically guided movement of cells, plays an important role in several biological processes including cancer, wound healing, and embryogenesis. Chemotacting cells are able to sense shallow chemical gradients where the concentration of chemoattractant differs by only a few percent from one side of the cell to the other, over a wide range of local concentrations. Exactly what limits the chemotactic ability of these cells is presently unclear. Here we determine the chemotactic response of Dictyostelium cells to exponential gradients of varying steepness and local concentration of the chemoattractant cAMP. We find that the cells are sensitive to the steepness of the gradient as well as to the local concentration. Using information theory techniques, we derive a formula for the mutual information between the input gradient and the spatial distribution of bound receptors and also compute the mutual information between the input gradient and the motility direction in the experiments. A comparison between these quantities reveals that for shallow gradients, in which the concentration difference between the back and the front of a 10-mum-diameter cell is <5%, and for small local concentrations (<10 nM) the intracellular information loss is insignificant. Thus, external fluctuations due to the finite number of receptors dominate and limit the chemotactic response. For steeper gradients and higher local concentrations, the intracellular information processing is suboptimal and results in a smaller mutual information between the input gradient and the motility direction than would have been predicted from the ligand-receptor binding process.
趋化性,即细胞在化学物质引导下的运动,在包括癌症、伤口愈合和胚胎发育在内的多个生物学过程中发挥着重要作用。趋化细胞能够感知浅化学梯度,即在广泛的局部浓度范围内,趋化因子的浓度在细胞一侧到另一侧仅相差百分之几。目前尚不清楚究竟是什么限制了这些细胞的趋化能力。在这里,我们确定了盘基网柄菌细胞对趋化因子环磷酸腺苷(cAMP)不同陡度和局部浓度的指数梯度的趋化反应。我们发现细胞对梯度的陡度以及局部浓度都很敏感。利用信息论技术,我们推导出输入梯度与结合受体的空间分布之间的互信息公式,并在实验中计算了输入梯度与运动方向之间的互信息。这些量之间的比较表明,对于浅梯度(直径为10微米的细胞前后浓度差<5%)和小局部浓度(<10 nM),细胞内信息损失微不足道。因此,由于受体数量有限导致的外部波动起主导作用并限制了趋化反应。对于较陡的梯度和较高的局部浓度,细胞内信息处理并非最优,导致输入梯度与运动方向之间的互信息比从配体 - 受体结合过程预测的要小。