Bhomkar Prasanna, Materi Wayne, Semenchenko Valentyna, Wishart David S
Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada.
Gene Regul Syst Bio. 2010 Mar 24;4:1-17. doi: 10.4137/grsb.s4525.
Functionalities which may be genetically programmed into a bacterium are limited by its range of possible activities and its sensory capabilities. Therefore, enhancing the bacterial sensory repertoire is a crucial step for expanded utility in potential biomedical, industrial or environmental applications. Using microarray and qRT-PCR analyses, we have investigated transcription in E. coli (strain CSH50) following FimH-mediated adhesion to biocompatible substrates. Specifically, wild-type FimH-mediated adhesion of E. coli to mannose agarose beads and His-tagged FimH-mediated adhesion to Ni(2+)-NTA beads both led to induction of ahpCF, dps, grxA and marRAB genes among bound cells relative to unbound cells. The strongly-induced genes are known to be regulated by OxyR or SoxS cytoplasmic redox sensors. Some differentially altered genes also overlapped with those implicated in biofilm formation. This study provides an insight into transcriptional events following FimH-mediated adhesion and may provide a platform for elucidation of the signaling circuit necessary for engineering a synthetic attachment response in E. coli.
可能通过基因编程赋予细菌的功能受到其可能的活动范围和传感能力的限制。因此,增强细菌的传感功能库是扩大其在潜在生物医学、工业或环境应用中的效用的关键一步。通过微阵列和定量逆转录聚合酶链反应分析,我们研究了在FimH介导的大肠杆菌(CSH50菌株)与生物相容性底物粘附后其转录情况。具体而言,野生型FimH介导的大肠杆菌与甘露糖琼脂糖珠的粘附以及His标签化的FimH介导的与Ni(2+)-NTA珠的粘附,相对于未结合细胞,均导致结合细胞中ahpCF、dps、grxA和marRAB基因的诱导。已知这些强烈诱导的基因受OxyR或SoxS细胞质氧化还原传感器调控。一些差异改变的基因也与那些参与生物膜形成的基因重叠。本研究深入了解了FimH介导的粘附后的转录事件,并可能为阐明在大肠杆菌中设计合成附着反应所需的信号传导回路提供一个平台。