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奥氏盐菌果糖激酶同源蛋白的晶体结构

Crystal structure of a fructokinase homolog from Halothermothrix orenii.

机构信息

Department of Biological Sciences, 14 Science Drive 4, National University of Singapore, Singapore 117543, Singapore.

出版信息

J Struct Biol. 2010 Sep;171(3):397-401. doi: 10.1016/j.jsb.2010.05.007. Epub 2010 May 21.

Abstract

Fructokinase (FRK; EC 2.7.1.4) catalyzes the phosphorylation of d-fructose to d-fructose 6-phosphate (F6P). This irreversible and near rate-limiting step is a central and regulatory process in plants and bacteria, which channels fructose into a metabolically active state for glycolysis. Towards understanding the mechanism of FRK, here we report the crystal structure of a FRK homolog from a thermohalophilic bacterium Halothermothrixorenii (Hore_18220 in sequence databases). The structure of the Hore_18220 protein reveals a catalytic domain with a Rossmann-like fold and a beta-sheet "lid" for dimerization. Based on comparison of Hore_18220 to structures of related proteins, we propose its mechanism of action, in which the lid serves to regulate access to the substrate binding sites. Close relationship of Hore_18220 and plant FRK enzymes allows us to propose a model for the structure and function of FRKs.

摘要

果糖激酶(FRK;EC 2.7.1.4)催化 D-果糖磷酸化为 D-果糖 6-磷酸(F6P)。这是一个不可逆的、接近限速的步骤,是植物和细菌中一个中心的调节过程,将果糖转化为糖酵解的代谢活跃状态。为了理解 FRK 的机制,我们在此报道了来自嗜热盐古菌 Halothermothrix orenii 的 FRK 同源物(在序列数据库中为 Hore_18220)的晶体结构。Hore_18220 蛋白的结构揭示了一个具有 Rossmann 样折叠和用于二聚化的β-片层“盖子”的催化结构域。通过将 Hore_18220 与相关蛋白的结构进行比较,我们提出了其作用机制,其中盖子用于调节对底物结合位点的进入。Hore_18220 与植物 FRK 酶的密切关系使我们能够提出 FRK 的结构和功能模型。

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