Umeda Takashi, Katsuki Junichi, Ashikawa Yuji, Usami Yusuke, Inoue Kengo, Noguchi Haruko, Fujimoto Zui, Yamane Hisakazu, Nojiri Hideaki
Biotechnology Research Center, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Jun 1;66(Pt 6):712-4. doi: 10.1107/S1744309110014491. Epub 2010 May 29.
Carbazole 1,9a-dioxygenase (CARDO) is the initial enzyme of the carbazole-degradation pathway. The CARDO of Novosphingobium sp. KA1 consists of a terminal oxygenase, a putidaredoxin-type ferredoxin and a ferredoxin-NADH oxidoreductase (Red) and is classified as a class IIA Rieske oxygenase. Red from KA1 was crystallized at 278 K by the hanging-drop vapour-diffusion method using PEG 4000. The crystal diffracted to 1.58 A resolution and belonged to space group P3(2), with unit-cell parameters a = b = 92.2, c = 78.6 A, alpha = gamma = 90, beta = 120 degrees . Preliminary analysis of the X-ray diffraction data revealed that the asymmetric unit contained two Red monomers. The crystal appeared to be a merohedral twin, with a twin fraction of 0.32 and twin law (-h, -k, l).
咔唑1,9a-双加氧酶(CARDO)是咔唑降解途径的起始酶。新鞘氨醇菌属KA1的CARDO由一个末端加氧酶、一个恶臭假单胞菌型铁氧还蛋白和一个铁氧还蛋白-NADH氧化还原酶(Red)组成,被归类为IIA型里氏氧化酶。使用聚乙二醇4000通过悬滴气相扩散法在278 K下使KA1的Red结晶。晶体衍射分辨率达到1.58 Å,属于P3(2)空间群,晶胞参数a = b = 92.2,c = 78.6 Å,α = γ = 90°,β = 120°。对X射线衍射数据的初步分析表明,不对称单元包含两个Red单体。该晶体似乎是一个部分孪晶,孪晶分数为0.32,孪晶法则为(-h,-k,l)。