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组蛋白 H3 丝氨酸 57 和赖氨酸 56 在转录延伸和从 S 期压力中恢复过程中相互作用。

Histone H3 serine 57 and lysine 56 interplay in transcription elongation and recovery from S-phase stress.

机构信息

Department of Molecular Biology, Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen, The Netherlands.

出版信息

PLoS One. 2010 May 26;5(5):e10851. doi: 10.1371/journal.pone.0010851.

DOI:10.1371/journal.pone.0010851
PMID:20520775
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2877106/
Abstract

BACKGROUND

Acetylation of lysine 56 of histone H3 plays an important role in the DNA damage response and it has been postulated to play an as yet undefined role in transcription, both in yeast and in higher eukaryotes. Because phosphorylated human histone H3 serine 57 peptides have been detected by mass spectrometry we examined whether H3-S57 phosphorylation interplays with H3-K56 acetylation in vivo.

METHODOLOGY/PRINCIPAL FINDINGS: To explore the physiological role of H3-S57, H3-K56 was mutated to mimic constitutively (un)acetylated forms of H3-K56 and these were combined with constitutively (un)phosphorylated mimics of H3-S57, in yeast. A phosphorylated serine mimic at position 57 lessened sensitivities to a DNA replication fork inhibitor and to a transcription elongation inhibitor that were caused by an acetylated lysine mimic at position 56, while the same substitution exacerbated sensitivities due to mimicking a constitutive non-acetylated lysine at position 56. Strikingly, opposite results were obtained in the context of a serine to alanine substitution at position 57 of histone H3.

CONCLUSIONS/SIGNIFICANCE: The phenotypes elicited and the context-dependent interplay of the H3-K56 and -S57 point mutations that mimic their respective modification states suggest that serine 57 phosphorylation promotes a nucleosomal transaction when lysine 56 is acetylated. We speculate that histone H3-S57 couples H3-K56 acetylation to histone quaternary structures involving arginine 40 on histone H4 helix 1.

摘要

背景

组蛋白 H3 赖氨酸 56 的乙酰化在 DNA 损伤反应中起着重要作用,并且在酵母和高等真核生物中,它被假设在转录中起着尚未定义的作用。由于通过质谱法检测到磷酸化的人组蛋白 H3 丝氨酸 57 肽,我们研究了 H3-S57 磷酸化是否与体内 H3-K56 乙酰化相互作用。

方法/主要发现:为了探索 H3-S57 的生理作用,我们将 H3-K56 突变为模拟组蛋白 H3-K56 的持续(未)乙酰化形式,并与 H3-S57 的持续(未)磷酸化模拟物结合,在酵母中进行。第 57 位磷酸丝氨酸模拟物减轻了第 56 位乙酰化赖氨酸模拟物引起的 DNA 复制叉抑制剂和转录延伸抑制剂的敏感性,而第 57 位丝氨酸模拟物取代则加剧了由于模拟第 56 位持续非乙酰化赖氨酸而引起的敏感性。引人注目的是,在组蛋白 H3 第 57 位丝氨酸到丙氨酸取代的背景下,得到了相反的结果。

结论/意义:这些表型的产生以及模拟其修饰状态的 H3-K56 和 -S57 点突变之间的上下文依赖性相互作用表明,当赖氨酸 56 乙酰化时,丝氨酸 57 磷酸化促进核小体转化。我们推测组蛋白 H3-S57 将 H3-K56 乙酰化与涉及组蛋白 H4 螺旋 1 上精氨酸 40 的组蛋白四级结构偶联。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8220/2877106/1fa29e1b7724/pone.0010851.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8220/2877106/fa001353e563/pone.0010851.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8220/2877106/4d631c642960/pone.0010851.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8220/2877106/d88593623411/pone.0010851.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8220/2877106/63d86ce1c155/pone.0010851.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8220/2877106/1fa29e1b7724/pone.0010851.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8220/2877106/fa001353e563/pone.0010851.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8220/2877106/4d631c642960/pone.0010851.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8220/2877106/d88593623411/pone.0010851.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8220/2877106/63d86ce1c155/pone.0010851.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8220/2877106/1fa29e1b7724/pone.0010851.g005.jpg

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本文引用的文献

1
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2
The Rtt109 histone acetyltransferase facilitates error-free replication to prevent CAG/CTG repeat contractions.Rtt109 组蛋白乙酰转移酶促进无错误复制,以防止 CAG/CTG 重复序列的收缩。
DNA Repair (Amst). 2010 Apr 4;9(4):414-20. doi: 10.1016/j.dnarep.2009.12.022. Epub 2010 Jan 18.
3
Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
在配子发生过程中进行系统的遗传和蛋白质组学筛选,确定 H2BK34 甲基化为进化保守的减数分裂标记。
Epigenetics Chromatin. 2020 Sep 15;13(1):35. doi: 10.1186/s13072-020-00349-5.
4
Multisite Substrate Recognition in Asf1-Dependent Acetylation of Histone H3 K56 by Rtt109.Asf1 依赖性底物识别在 Rtt109 介导的组蛋白 H3 K56 乙酰化中的作用
Cell. 2018 Aug 9;174(4):818-830.e11. doi: 10.1016/j.cell.2018.07.005. Epub 2018 Jul 26.
5
Histone H3.3 sub-variant H3mm7 is required for normal skeletal muscle regeneration.组蛋白 H3.3 亚型 H3mm7 对于正常的骨骼肌再生是必需的。
Nat Commun. 2018 Apr 11;9(1):1400. doi: 10.1038/s41467-018-03845-1.
6
Quantitative proteomic analysis of histone modifications.组蛋白修饰的定量蛋白质组学分析。
Chem Rev. 2015 Mar 25;115(6):2376-418. doi: 10.1021/cr500491u. Epub 2015 Feb 17.
7
DYRK1A phoshorylates histone H3 to differentially regulate the binding of HP1 isoforms and antagonize HP1-mediated transcriptional repression.双特异性酪氨酸磷酸化调节激酶1A(DYRK1A)使组蛋白H3磷酸化,以差异性地调节异染色质蛋白1(HP1)亚型的结合,并拮抗HP1介导的转录抑制。
EMBO Rep. 2014 Jun;15(6):686-94. doi: 10.15252/embr.201338356. Epub 2014 May 12.
8
Getting down to the core of histone modifications.深入探究组蛋白修饰的核心。
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9
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10
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PLoS One. 2013;8(2):e51765. doi: 10.1371/journal.pone.0051765. Epub 2013 Feb 22.
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Sci Signal. 2010 Jan 12;3(104):ra3. doi: 10.1126/scisignal.2000475.
4
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5
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Mol Cell. 2009 Oct 9;36(1):153-63. doi: 10.1016/j.molcel.2009.07.027.
6
A negatively charged residue in place of histone H3K56 supports chromatin assembly factor association but not genotoxic stress resistance.一个带负电荷的残基取代组蛋白 H3K56,支持染色质组装因子的结合,但不支持遗传毒性应激抗性。
DNA Repair (Amst). 2009 Dec 3;8(12):1371-9. doi: 10.1016/j.dnarep.2009.09.004. Epub 2009 Sep 30.
7
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Cell Cycle. 2009 Aug 15;8(16):2664-6. doi: 10.4161/cc.8.16.9367. Epub 2009 Aug 26.
8
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Cell Cycle. 2009 Aug 15;8(16):2662-3. doi: 10.4161/cc.8.16.9329. Epub 2009 Aug 22.
9
Caenorhabditis elegans has a phosphoproteome atypical for metazoans that is enriched in developmental and sex determination proteins.秀丽隐杆线虫具有后生动物非典型的磷酸化蛋白质组,该蛋白质组在发育和性别决定蛋白中富集。
J Proteome Res. 2009 Aug;8(8):4039-49. doi: 10.1021/pr900384k.
10
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DNA Repair (Amst). 2009 Sep 2;8(9):1089-100. doi: 10.1016/j.dnarep.2009.04.010. Epub 2009 May 30.