Centre for Infectious Diseases, School of Biological Sciences, University of Edinburgh, Edinburgh, UK.
PLoS One. 2010 Jun 17;5(6):e11185. doi: 10.1371/journal.pone.0011185.
Various approaches have been used to investigate how properties of farm contact networks impact on the transmission of infectious diseases. The potential for transmission of an infection through a contact network can be evaluated in terms of the basic reproduction number, R(0). The magnitude of R(0) is related to the mean contact rate of a host, in this case a farm, and is further influenced by heterogeneities in contact rates of individual hosts. The latter can be evaluated as the second order moments of the contact matrix (variances in contact rates, and co-variance between contacts to and from individual hosts). Here we calculate these quantities for the farms in a country-wide livestock network: >15,000 Scottish sheep farms in each of 4 years from July 2003 to June 2007. The analysis is relevant to endemic and chronic infections with prolonged periods of infectivity of affected animals, and uses different weightings of contacts to address disease scenarios of low, intermediate and high animal-level prevalence.
Analysis of networks of Scottish farms via sheep movements from July 2003 to June 2007 suggests that heterogeneities in movement patterns (variances and covariances of rates of movement on and off the farms) make a substantial contribution to the potential for the transmission of infectious diseases, quantified as R(0), within the farm population. A small percentage of farms (<20%) contribute the bulk of the transmission potential (>80%) and these farms could be efficiently targeted by interventions aimed at reducing spread of diseases via animal movement.
为了研究农场接触网络的特性如何影响传染病的传播,人们已经提出了各种方法。可以根据基本繁殖数 R(0)来评估通过接触网络传播感染的可能性。R(0)的大小与宿主(在这种情况下是农场)的平均接触率有关,并且进一步受到个体宿主的接触率异质性的影响。后者可以通过接触矩阵的二阶矩来评估(接触率的方差以及个体宿主的接触到和来自接触的协方差)。在这里,我们计算了 2003 年 7 月至 2007 年 6 月四年间全国牲畜网络中农场的这些数量:苏格兰的 15000 多个绵羊农场。该分析与具有较长感染期的地方性和慢性感染有关,并且使用不同的接触权重来解决低、中和高动物水平流行率的疾病情况。
通过对 2003 年 7 月至 2007 年 6 月期间的绵羊运动进行苏格兰农场网络分析表明,运动模式的异质性(农场内外的运动率的方差和协方差)对农场内传染病传播的潜力(量化为 R(0))有很大的贡献。一小部分农场(<20%)贡献了大部分传播潜力(>80%),这些农场可以通过旨在减少动物运动传播疾病的干预措施有效地针对这些农场。