Suppr超能文献

重新评估假诺卡氏菌亚目系统发育:将棒杆菌科(Actinosynnemataceae)中属于 Labeda 和 Kroppenstedt 2000 年修正的 Zhi 等人 2009 年系统发育的属转移到假诺卡氏菌科(Pseudonocardiaceae)Embley 等人 1989 年修正的 Zhi 等人 2009 年系统发育中。

Reassessment of the systematics of the suborder Pseudonocardineae: transfer of the genera within the family Actinosynnemataceae Labeda and Kroppenstedt 2000 emend. Zhi et al. 2009 into an emended family Pseudonocardiaceae Embley et al. 1989 emend. Zhi et al. 2009.

机构信息

National Center for Agricultural Utilization Research, USDA-ARS, Peoria, IL 61604, USA.

School of Biology, University of Newcastle, Newcastle upon Tyne NE1 7RU, UK.

出版信息

Int J Syst Evol Microbiol. 2011 Jun;61(Pt 6):1259-1264. doi: 10.1099/ijs.0.024984-0. Epub 2010 Jul 2.

Abstract

The taxonomic status of the families Actinosynnemataceae and Pseudonocardiaceae was assessed based on 16S rRNA gene sequence data available for the 151 taxa with validly published names, as well as chemotaxonomic and morphological properties available from the literature. 16S rRNA gene sequences for the type strains of all taxa within the suborder Pseudonocardineae were subjected to phylogenetic analyses using different algorithms in arb and phylip. The description of many new genera and species within the suborder Pseudonocardineae since the family Actinosynnemataceae was proposed in 2000 has resulted in a markedly different distribution of chemotaxonomic markers within the suborder from that observed at that time. For instance, it is noted that species of the genera Actinokineospora and Allokutzneria contain arabinose in whole-cell hydrolysates, which is not observed in the other genera within the Actinosynnemataceae, and that there are many genera within the family Pseudonocardiaceae as currently described that do not contain arabinose. Phylogenetic analyses of 16S rRNA gene sequences for all taxa within the suborder do not provide any statistical support for the family Actinosynnemataceae, nor are signature nucleotides found that support its continued differentiation from the family Pseudonocardiaceae. The description of the family Pseudonocardiaceae is therefore emended to include the genera previously classified within the family Actinosynnemataceae and the description of the suborder Pseudonocardineae is also emended to reflect this reclassification.

摘要

基于可获得的 151 个有效发表名称的 16S rRNA 基因序列数据以及文献中的化学生态和形态学特性,评估了 Actinosynnemataceae 和 Pseudonocardiaceae 科的分类地位。使用 arb 和 phylip 中的不同算法,对亚目 Pseudonocardineae 内所有分类群的模式株 16S rRNA 基因序列进行了系统发育分析。自 2000 年提出 Actinosynnemataceae 科以来,亚目 Pseudonocardineae 中描述了许多新属和新种,这导致亚目内的化学生态标记分布与当时观察到的明显不同。例如,注意到 Actinokineospora 和 Allokutzneria 属的物种在全细胞水解物中含有阿拉伯糖,而在 Actinosynnemataceae 科的其他属中则没有观察到,而且目前描述的 Pseudonocardiaceae 科中有许多属不含有阿拉伯糖。对亚目内所有分类群的 16S rRNA 基因序列进行系统发育分析,既不能为 Actinosynnemataceae 科提供任何统计支持,也找不到支持其与 Pseudonocardiaceae 科继续分化的特征核苷酸。因此,对 Pseudonocardiaceae 科的描述进行了修订,包括以前分类在 Actinosynnemataceae 科内的属,并且对 Pseudonocardineae 亚目的描述也进行了修订,以反映这种重新分类。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验