Meier-Kolthoff Jan P, Lu Megan, Huntemann Marcel, Lucas Susan, Lapidus Alla, Copeland Alex, Pitluck Sam, Goodwin Lynne A, Han Cliff, Tapia Roxanne, Pötter Gabriele, Land Miriam, Ivanova Natalia, Rohde Manfred, Göker Markus, Detter John C, Woyke Tanja, Kyrpides Nikos C, Klenk Hans-Peter
Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
Stand Genomic Sci. 2013 Sep 30;9(1):28-41. doi: 10.4056/sigs.4207886. eCollection 2013 Oct 16.
Saccharomonospora cyanea Runmao et al. 1988 is a member of the genus Saccharomonospora in the family Pseudonocardiaceae that is moderately well characterized at the genome level thus far. Members of the genus Saccharomonospora are of interest because they originate from diverse habitats, such as soil, leaf litter, manure, compost, surface of peat, moist, over-heated grain, and ocean sediment, where they probably play a role in the primary degradation of plant material by attacking hemicellulose. Species of the genus Saccharomonospora are usually Gram-positive, non-acid fast, and are classified among the actinomycetes. S. cyanea is characterized by a dark blue (= cyan blue) aerial mycelium. After S. viridis, S. azurea, and S. marina, S. cyanea is only the fourth member in the genus for which a completely sequenced (non-contiguous finished draft status) type strain genome will be published. Here we describe the features of this organism, together with the draft genome sequence, and annotation. The 5,408,301 bp long chromosome with its 5,139 protein-coding and 57 RNA genes was sequenced as part of the DOE funded Community Sequencing Program (CSP) 2010 at the Joint Genome Institute (JGI).
嗜蓝糖单孢菌Runmao等人于1988年发现，它是假诺卡氏菌科糖单孢菌属的成员，迄今为止在基因组水平上已有适度的特征描述。糖单孢菌属的成员备受关注，因为它们源自多种生境，如土壤、落叶、粪便、堆肥、泥炭表面、潮湿的过热谷物以及海洋沉积物，在这些生境中它们可能通过攻击半纤维素在植物材料的初级降解中发挥作用。糖单孢菌属的物种通常为革兰氏阳性、非抗酸菌，属于放线菌。嗜蓝糖单孢菌的特征是具有深蓝色（=蓝青色）气生菌丝体。继绿色糖单孢菌、天蓝色糖单孢菌和海洋糖单孢菌之后，嗜蓝糖单孢菌是该属中第四个其全序列（非连续完成草图状态）的模式菌株基因组将被发表的成员。在此，我们描述该生物体的特征，以及草图基因组序列和注释。这个长度为5,408,301 bp的染色体，含有5,139个蛋白质编码基因和57个RNA基因，是作为美国能源部资助的联合基因组研究所（JGI）2010年社区测序计划（CSP）的一部分进行测序的。
