Wattanaphansak Suphot, Gebhart Connie J, Anderson Janet M, Singer Randall S
Department of Veterinary and Biomedical Sciences, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, USA.
J Vet Diagn Invest. 2010 Jul;22(4):598-602. doi: 10.1177/104063871002200416.
The objective of the present study was to develop a quantitative polymerase chain reaction (qPCR) assay using SYBR Green for quantification of Lawsonia intracellularis in cell culture and pig fecal samples. Specific primers were designed and tested using the aspartate ammonia-lyase (aspA) gene as a target. Serial 10-fold dilutions of cell culture samples and several sets of spiked feces were used for qPCR optimization. The lower limit of the linear range of the assay in cell culture was 5.1 x 10(2) L. intracellularis/ml. A concentration of between 2.55 x 10(4) and 2.55 x 10(3) L. intracellularis/g was the lower limit of the linear range when testing community DNA from spiked fecal samples. From both cell culture and fecal samples, L. intracellularis could be detected but not accurately quantified at levels approximately 1 log below the linear range. No cross-reactivity of qPCR was found when the assay was tested using the DNA extracted from 16 species of enteric bacteria commonly found in pig feces or closely related to L. intracellularis. The new qPCR assay might prove to be a sensitive, specific, precise, and accurate method for the detection and quantification of L. intracellularis in field samples.
本研究的目的是开发一种使用SYBR Green的定量聚合酶链反应(qPCR)检测方法,用于定量细胞培养物和猪粪便样本中的胞内劳森菌。以天冬氨酸氨裂解酶(aspA)基因为靶标设计并测试了特异性引物。使用细胞培养物样本的10倍系列稀释液和几组加标粪便进行qPCR优化。该检测方法在细胞培养物中的线性范围下限为5.1×10² 胞内劳森菌/ml。检测加标粪便样本的群落DNA时,线性范围下限为2.55×10⁴至2.55×10³胞内劳森菌/g。在细胞培养物和粪便样本中,均可检测到胞内劳森菌,但在比线性范围低约1个对数的水平下无法准确定量。使用从猪粪便中常见的16种肠道细菌或与胞内劳森菌密切相关的细菌中提取的DNA对该检测方法进行测试时,未发现qPCR的交叉反应。新的qPCR检测方法可能是一种用于检测和定量田间样本中胞内劳森菌的灵敏、特异、精确且准确的方法。