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Effect of different modes of viral spread on the dynamics of multiply infected cells in human immunodeficiency virus infection.
J R Soc Interface. 2011 Feb 6;8(55):289-300. doi: 10.1098/rsif.2010.0266. Epub 2010 Jul 21.
2
Increased burst size in multiply infected cells can alter basic virus dynamics.
Biol Direct. 2012 May 8;7:16. doi: 10.1186/1745-6150-7-16.
3
Effect of synaptic transmission on viral fitness in HIV infection.
PLoS One. 2012;7(11):e48361. doi: 10.1371/journal.pone.0048361. Epub 2012 Nov 15.
4
A hybrid stochastic-deterministic approach to explore multiple infection and evolution in HIV.
PLoS Comput Biol. 2021 Dec 22;17(12):e1009713. doi: 10.1371/journal.pcbi.1009713. eCollection 2021 Dec.
7
Modeling Viral Spread.
Annu Rev Virol. 2016 Sep 29;3(1):555-572. doi: 10.1146/annurev-virology-110615-042249. Epub 2016 Aug 31.
8
A stochastic model for early HIV-1 population dynamics.
J Theor Biol. 1998 Dec 21;195(4):451-63. doi: 10.1006/jtbi.1998.0806.
9
HIV dynamics with multiple infections of target cells.
Proc Natl Acad Sci U S A. 2005 Jun 7;102(23):8198-203. doi: 10.1073/pnas.0407498102. Epub 2005 May 31.
10
Cell-to-cell infection by HIV contributes over half of virus infection.
Elife. 2015 Oct 6;4:e08150. doi: 10.7554/eLife.08150.

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Spatial information allows inference of the prevalence of direct cell-to-cell viral infection.
PLoS Comput Biol. 2024 Jul 23;20(7):e1012264. doi: 10.1371/journal.pcbi.1012264. eCollection 2024 Jul.
2
Incorporating Intracellular Processes in Virus Dynamics Models.
Microorganisms. 2024 Apr 30;12(5):900. doi: 10.3390/microorganisms12050900.
3
Superinfection exclusion: A viral strategy with short-term benefits and long-term drawbacks.
PLoS Comput Biol. 2022 May 10;18(5):e1010125. doi: 10.1371/journal.pcbi.1010125. eCollection 2022 May.
4
The HIV Env Glycoprotein Conformational States on Cells and Viruses.
mBio. 2022 Apr 26;13(2):e0182521. doi: 10.1128/mbio.01825-21. Epub 2022 Mar 24.
5
The role of spatial structure in the evolution of viral innate immunity evasion: A diffusion-reaction cellular automaton model.
PLoS Comput Biol. 2020 Feb 10;16(2):e1007656. doi: 10.1371/journal.pcbi.1007656. eCollection 2020 Feb.
6
Within-host infectious disease models accommodating cellular coinfection, with an application to influenza.
Virus Evol. 2019 Jul 8;5(2):vez018. doi: 10.1093/ve/vez018. eCollection 2019 Jul.
7
Multiple infection of cells changes the dynamics of basic viral evolutionary processes.
Evol Lett. 2018 Dec 31;3(1):104-115. doi: 10.1002/evl3.95. eCollection 2019 Feb.
8
Number of infection events per cell during HIV-1 cell-free infection.
Sci Rep. 2017 Jul 26;7(1):6559. doi: 10.1038/s41598-017-03954-9.
9
Quantification of Hepatitis C Virus Cell-to-Cell Spread Using a Stochastic Modeling Approach.
J Virol. 2015 Jul;89(13):6551-61. doi: 10.1128/JVI.00016-15. Epub 2015 Apr 1.
10
Modeling multiple infection of cells by viruses: Challenges and insights.
Math Biosci. 2015 Jun;264:21-8. doi: 10.1016/j.mbs.2015.03.001. Epub 2015 Mar 10.

本文引用的文献

1
Multiple HIV-1 infection of cells and the evolutionary dynamics of cytotoxic T lymphocyte escape mutants.
Evolution. 2009 Sep;63(9):2326-39. doi: 10.1111/j.1558-5646.2009.00727.x. Epub 2009 May 21.
2
Quantitative 3D video microscopy of HIV transfer across T cell virological synapses.
Science. 2009 Mar 27;323(5922):1743-7. doi: 10.1126/science.1167525.
3
Viral complementation allows HIV-1 replication without integration.
Retrovirology. 2008 Jul 9;5:60. doi: 10.1186/1742-4690-5-60.
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Recombination increases human immunodeficiency virus fitness, but not necessarily diversity.
J Gen Virol. 2008 Jun;89(Pt 6):1467-1477. doi: 10.1099/vir.0.83668-0.
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Epistasis between deleterious mutations and the evolution of recombination.
Trends Ecol Evol. 2007 Jun;22(6):308-15. doi: 10.1016/j.tree.2007.02.014. Epub 2007 Mar 6.
10
Stochastic or deterministic: what is the effective population size of HIV-1?
Trends Microbiol. 2006 Dec;14(12):507-11. doi: 10.1016/j.tim.2006.10.001. Epub 2006 Oct 16.

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