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谷物基因组中的类胚乳蛋白(GLPs):基因聚类及在植物防御中的动态作用。

Germin-like proteins (GLPs) in cereal genomes: gene clustering and dynamic roles in plant defence.

机构信息

Institute for Plant Biology, University of Zurich, Zollikerstrasse 107, 8008 Zurich, Switzerland.

出版信息

Funct Integr Genomics. 2010 Nov;10(4):463-76. doi: 10.1007/s10142-010-0184-1. Epub 2010 Aug 4.

Abstract

The recent release of the genome sequences of a number of crop and model plant species has made it possible to define the genome organisation and functional characteristics of specific genes and gene families of agronomic importance. For instance, Sorghum bicolor, maize (Zea mays) and Brachypodium distachyon genome sequences along with the model grass species rice (Oryza sativa) enable the comparative analysis of genes involved in plant defence. Germin-like proteins (GLPs) are a small, functionally and taxonomically diverse class of cupin-domain containing proteins that have recently been shown to cluster in an area of rice chromosome 8. The genomic location of this gene cluster overlaps with a disease resistance QTL that provides defence against two rice fungal pathogens (Magnaporthe oryzae and Rhizoctonia solani). Studies showing the involvement of GLPs in basal host resistance against powdery mildew (Blumeria graminis ssp.) have also been reported in barley and wheat. In this mini-review, we compare the close proximity of GLPs in publicly available cereal crop genomes and discuss the contribution that these proteins, and their genome sequence organisation, play in plant defence.

摘要

最近发布的一些作物和模式植物物种的基因组序列,使得人们有可能定义具有农业重要性的特定基因和基因家族的基因组组织和功能特征。例如,高粱、玉米和短柄草基因组序列以及模式草本植物水稻,使得参与植物防御的基因的比较分析成为可能。类萌发蛋白(GLPs)是一类小的、功能和分类上多样化的含 cupin 结构域的蛋白质,最近的研究表明它们在水稻染色体 8 的一个区域聚集。该基因簇的基因组位置与一个抗病 QTL 重叠,该 QTL为两种水稻真菌病原体(稻瘟病菌和立枯丝核菌)提供防御。在大麦和小麦中也有报道称,GLPs 参与了对白粉病(小麦白粉菌)的基础宿主抗性。在这篇迷你综述中,我们比较了 GLPs 在公开可用的谷类作物基因组中的紧密接近程度,并讨论了这些蛋白质及其基因组序列组织在植物防御中的作用。

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