International Crops Research Institute for the Semi-Arid Tropics, Patancheru, Hyderabad, Andhra Pradesh 502324, India.
Mycopathologia. 2011 Mar;171(3):223-30. doi: 10.1007/s11046-010-9354-x. Epub 2010 Aug 10.
Fusarium species are dominant within the sorghum grain mold complex. Some species of Fusarium involved in grain mold complex produce mycotoxins, such as fumonisins. An attempt was made to identify Fusarium spp. associated with grain mold complex in major sorghum-growing areas in India through AFLP-based grouping of the isolates and to further confirm the species by sequencing part of α-Elongation factor gene and comparing the sequences with that available in the NCBI database. The dendrogram generated from the AFLP data clustered the isolates into 5 groups. Five species of Fusarium--F. proliferatum, F. thapsinum, F. equiseti, F. andiyazi and F. sacchari were identified based on sequence similarity of α-Elongation factor gene of the test isolates with those in the NCBI database. Fusarium thapsinum was identified as predominant species in Fusarium--grain mold complex in India and F. proliferatum as highly toxigenic for fumonisins production. Analysis of molecular variance (AMOVA) revealed 54% of the variation in the AFLP patterns of 63 isolates was due to the differences between Fusarium species, and 46% was due to differences between the strains within a species.
镰刀菌属物种是高粱籽粒霉变复合体中的主要优势种群。一些参与籽粒霉变复合体的镰刀菌属物种会产生霉菌毒素,如伏马菌素。本研究通过基于 AFLP 的分离物聚类,尝试鉴定印度主要高粱种植区与籽粒霉变复合体相关的镰刀菌属物种,并通过对α-延伸因子基因的部分序列进行测序,将序列与 NCBI 数据库中的序列进行比较,从而进一步确认这些物种。AFLP 数据生成的聚类树将分离物聚类为 5 个组。根据测试分离物的α-延伸因子基因与 NCBI 数据库中序列的相似性,鉴定出了 5 种镰刀菌,分别为:层出镰刀菌、唐菖蒲镰刀菌、禾谷镰刀菌、安德逊镰刀菌和蔗镰刀菌。研究结果表明,唐菖蒲镰刀菌是印度镰刀菌-籽粒霉变复合体中的主要优势种群,而增殖镰刀菌则是伏马菌素产生的高毒性物种。分子方差分析(AMOVA)表明,63 个分离物 AFLP 图谱的 54%的变异是由于不同镰刀菌物种之间的差异引起的,46%的变异是由于同一物种内菌株之间的差异引起的。