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菠菜叶绿体核糖体蛋白L21进化起源的假说。

Hypothesis for the evolutionary origin of the chloroplast ribosomal protein L21 of spinach.

作者信息

Martin W, Lagrange T, Li Y F, Bisanz-Seyer C, Mache R

机构信息

Laboratoire de Biologie Moléculaire Végetale, Université Joseph Fourier, Grenoble, France.

出版信息

Curr Genet. 1990 Dec;18(6):553-6. doi: 10.1007/BF00327027.

DOI:10.1007/BF00327027
PMID:2076556
Abstract

A full size cDNA clone encoding the chloroplast ribosomal protein L21 from spinach is presented. The identity of the clone and the location of the transit peptide processing site were determined by comparison with the N-terminal amino acid sequence of the spinach chloroplast protein CS-L7 previously identified. L21 r-protein sequences from spinach, Marchantia polymorpha and Escherichia coli are compared. Quite surprisingly, the data do not suggest that the rpl21 nuclear gene from spinach was derived through intracellular gene transfer from the chloroplast genome. The possibility of a mitochondrial origin for rpl21 gene of spinach is discussed.

摘要

本文展示了一个编码菠菜叶绿体核糖体蛋白L21的全长cDNA克隆。通过与先前鉴定的菠菜叶绿体蛋白CS-L7的N端氨基酸序列进行比较，确定了该克隆的身份以及转运肽加工位点的位置。对菠菜、多形藓类和大肠杆菌的L21核糖体蛋白序列进行了比较。相当令人惊讶的是，数据并不表明菠菜的rpl21核基因是通过从叶绿体基因组进行细胞内基因转移而来的。本文还讨论了菠菜rpl21基因起源于线粒体的可能性。

相似文献

1
Hypothesis for the evolutionary origin of the chloroplast ribosomal protein L21 of spinach.菠菜叶绿体核糖体蛋白L21进化起源的假说。
Curr Genet. 1990 Dec;18(6):553-6. doi: 10.1007/BF00327027.
2
A ribosomal protein is encoded in the chloroplast DNA in a lower plant but in the nucleus in angiosperms. Isolation of the spinach L21 protein and cDNA clone with transit and an unusual repeat sequence.一种核糖体蛋白在低等植物中由叶绿体DNA编码，但在被子植物中由细胞核编码。菠菜L21蛋白及具有转运肽和异常重复序列的cDNA克隆的分离。
J Biol Chem. 1990 Sep 25;265(27):16699-703.
3
Ribosomal protein L35: identification in spinach chloroplasts and isolation of a cDNA clone encoding its cytoplasmic precursor.核糖体蛋白L35：在菠菜叶绿体中的鉴定及编码其胞质前体的cDNA克隆的分离
Biochemistry. 1990 Oct 16;29(41):9733-6. doi: 10.1021/bi00493a032.
4
Chloroplast ribosomal protein L13 is encoded in the nucleus and is considerably larger than its bacterial homologue. Construction, immunoisolation, and nucleotide sequence (including transit peptide) its cDNA clone from an angiosperm.叶绿体核糖体蛋白L13由细胞核编码，比其细菌同源物大得多。构建、免疫分离及其来自被子植物的cDNA克隆的核苷酸序列（包括转运肽）。
J Biol Chem. 1989 Feb 5;264(4):1968-71.
5
Presence in the stroma of chloroplasts of a large pool of a ribosomal protein not structurally related to any Escherichia coli ribosomal protein.在叶绿体基质中存在大量核糖体蛋白，该蛋白在结构上与任何大肠杆菌核糖体蛋白均无关联。
Mol Gen Genet. 1989 Oct;219(1-2):204-8. doi: 10.1007/BF00261178.
6
The nuclear:organelle distribution of chloroplast ribosomal proteins genes. Features of a cDNA clone encoding the cytoplasmic precursor of L11.叶绿体核糖体蛋白基因的细胞核：细胞器分布。编码L11细胞质前体的cDNA克隆的特征。
Biochimie. 1991 Jun;73(6):845-51. doi: 10.1016/0300-9084(91)90064-8.
7
Conservation and evolution of the nucleus-encoded and chloroplast-specific ribosomal proteins in pea and spinach.豌豆和菠菜中核编码及叶绿体特异性核糖体蛋白的保守性与进化
Gene. 1991 Jul 22;103(2):139-45. doi: 10.1016/0378-1119(91)90266-e.
8
Structure and expression of the nuclear gene coding for the chloroplast ribosomal protein L21: developmental regulation of a housekeeping gene by alternative promoters.编码叶绿体核糖体蛋白L21的核基因的结构与表达：看家基因受可变启动子的发育调控
Mol Cell Biol. 1993 Apr;13(4):2614-22. doi: 10.1128/mcb.13.4.2614-2622.1993.
9
Nuclear-encoded tobacco chloroplast ribosomal protein L24. Protein identification, sequence analysis of cDNAs encoding its cytoplasmic precursor, and mRNA and genomic DNA analysis.核编码的烟草叶绿体核糖体蛋白L24。蛋白质鉴定、编码其细胞质前体的cDNA序列分析以及mRNA和基因组DNA分析。
J Biol Chem. 1992 Oct 25;267(30):21705-11.
10
The Arabidopsis chloroplast ribosomal protein L21 is encoded by a nuclear gene of mitochondrial origin.拟南芥叶绿体核糖体蛋白L21由一个源自线粒体的核基因编码。
Gene. 2001 Aug 22;274(1-2):179-85. doi: 10.1016/s0378-1119(01)00613-8.

引用本文的文献

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Concerted gene recruitment in early plant evolution.早期植物进化中的协同基因募集。
Genome Biol. 2008;9(7):R109. doi: 10.1186/gb-2008-9-7-r109. Epub 2008 Jul 8.
2
Dating the monocot-dicot divergence and the origin of core eudicots using whole chloroplast genomes.利用完整叶绿体基因组确定单子叶植物与双子叶植物的分化时间及核心真双子叶植物的起源时间。
J Mol Evol. 2004 Apr;58(4):424-41. doi: 10.1007/s00239-003-2564-9.
3
Genes for two mitochondrial ribosomal proteins in flowering plants are derived from their chloroplast or cytosolic counterparts.

本文引用的文献

1
Site of synthesis of spinach chloroplast ribosomal proteins and formation of incomplete ribosomal particles in isolated chloroplasts.菠菜叶绿体核糖体蛋白的合成部位和分离叶绿体中不完全核糖体颗粒的形成。
Plant Mol Biol. 1984 Mar;3(2):83-90. doi: 10.1007/BF00040032.
2
The Spm (En) transposable element controls the excision of a 2-kb DNA insert at the wx allele of Zea mays.Spm（En）转座元件控制着玉米 wx 等位基因上 2kbDNA 插入片段的切除。
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3
Genetic and biochemical implications of the endosymbiotic origin of the chloroplast.
开花植物中两种线粒体核糖体蛋白的基因源自其叶绿体或胞质对应物。
Plant Cell. 2002 Apr;14(4):931-43. doi: 10.1105/tpc.010483.
4
Many parallel losses of infA from chloroplast DNA during angiosperm evolution with multiple independent transfers to the nucleus.在被子植物进化过程中，叶绿体DNA中的infA多次平行丢失，并多次独立转移至细胞核。
Plant Cell. 2001 Mar;13(3):645-58. doi: 10.1105/tpc.13.3.645.
5
Subpopulations of chloroplast ribosomes change during photoregulated development of Zea mays leaves: ribosomal proteins L2, L21, and L29.叶绿体核糖体亚群在玉米叶片光调节发育过程中发生变化：核糖体蛋白L2、L21和L29。
Proc Natl Acad Sci U S A. 1999 Aug 3;96(16):8997-9002. doi: 10.1073/pnas.96.16.8997.
6
Structure and expression of the nuclear gene coding for the chloroplast ribosomal protein L21: developmental regulation of a housekeeping gene by alternative promoters.编码叶绿体核糖体蛋白L21的核基因的结构与表达：看家基因受可变启动子的发育调控
Mol Cell Biol. 1993 Apr;13(4):2614-22. doi: 10.1128/mcb.13.4.2614-2622.1993.
7
A method for isolation of cDNA-quality mRNA from immature seeds of a gymnosperm rich in polyphenolics.一种从富含多酚的裸子植物未成熟种子中分离出cDNA质量mRNA的方法。
Plant Mol Biol. 1993 Jun;22(3):555-6. doi: 10.1007/BF00015986.
8
The smallest known eukaryotic genomes encode a protein gene: towards an understanding of nucleomorph functions.已知最小的真核生物基因组编码一种蛋白质基因：迈向对核质体功能的理解。
Mol Gen Genet. 1994 Jun 3;243(5):600-4. doi: 10.1007/BF00284209.
9
The trpA gene on the plastid genome of Cyanidium caldarium strain RK-1.嗜热栖热放线菌RK-1菌株质体基因组上的trpA基因。
Curr Genet. 1994 Apr;25(4):357-61. doi: 10.1007/BF00351490.
10
Nucleotide distribution in gymnosperm nuclear sequences suggests a model for GC-content change in land-plant nuclear genomes.裸子植物核序列中的核苷酸分布为陆地植物核基因组中GC含量变化提供了一种模型。
J Mol Evol. 1994 Jul;39(1):34-46. doi: 10.1007/BF00178247.
叶绿体内共生起源的遗传学及生物化学意义
J Mol Evol. 1981;17(3):133-9. doi: 10.1007/BF01733906.
4
A comprehensive set of sequence analysis programs for the VAX.一套适用于VAX的综合序列分析程序。
Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):387-95. doi: 10.1093/nar/12.1part1.387.
5
The structures of cytochrome c and the rates of molecular evolution.细胞色素c的结构与分子进化速率。
J Mol Evol. 1971;1(1):26-45. doi: 10.1007/BF01659392.
6
Evidence in favor of the symbiotic origin of chloroplasts: primary structure and evolution of tobacco glyceraldehyde-3-phosphate dehydrogenases.支持叶绿体共生起源的证据：烟草3-磷酸甘油醛脱氢酶的一级结构与进化
Cell. 1986 Oct 10;47(1):73-80. doi: 10.1016/0092-8674(86)90367-3.
7
Prokaryotic features of a nucleus-encoded enzyme. cDNA sequences for chloroplast and cytosolic glyceraldehyde-3-phosphate dehydrogenases from mustard (Sinapis alba).一种细胞核编码酶的原核生物特征。来自芥菜（白芥）的叶绿体和胞质甘油醛-3-磷酸脱氢酶的cDNA序列。
Eur J Biochem. 1986 Sep 1;159(2):323-31. doi: 10.1111/j.1432-1033.1986.tb09871.x.
8
Structure and organization of Marchantia polymorpha chloroplast genome. IV. Inverted repeat and small single copy regions.多歧藻叶绿体基因组的结构与组织。IV. 反向重复序列和小单拷贝区域。
J Mol Biol. 1988 Sep 20;203(2):353-72. doi: 10.1016/0022-2836(88)90004-6.
9
Endosymbiotic origin and codon bias of the nuclear gene for chloroplast glyceraldehyde-3-phosphate dehydrogenase from maize.玉米叶绿体甘油醛-3-磷酸脱氢酶核基因的内共生起源与密码子偏好性
J Mol Evol. 1987;26(4):320-8. doi: 10.1007/BF02101150.
10
The genes coding for subunit 3 of NADH dehydrogenase and for ribosomal protein S12 are present in the wheat and maize mitochondrial genomes and are co-transcribed.编码烟酰胺腺嘌呤二核苷酸脱氢酶亚基3和核糖体蛋白S12的基因存在于小麦和玉米的线粒体基因组中，并共同转录。
Mol Gen Genet. 1988 Dec;215(1):118-27. doi: 10.1007/BF00331312.