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Dop 在原核泛素样修饰途径中充当脱泛素酶。

Dop functions as a depupylase in the prokaryotic ubiquitin-like modification pathway.

机构信息

Department of Biology, Eidgenössische Technische Hochschule Zurich, Institute of Molecular Biology and Biophysics, Schafmattstrasse 20, Zurich CH-8093, Switzerland.

出版信息

EMBO Rep. 2010 Oct;11(10):791-7. doi: 10.1038/embor.2010.119. Epub 2010 Aug 27.

DOI:10.1038/embor.2010.119
PMID:20798673
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2948181/
Abstract

Post-translational modification of proteins with prokaryotic ubiquitin-like protein (Pup) is the bacterial equivalent of ubiquitination in eukaryotes. Mycobacterial pupylation is a two-step process in which the carboxy-terminal glutamine of Pup is first deamidated by Dop (deamidase of Pup) before ligation of the generated γ-carboxylate to substrate lysines by the Pup ligase PafA. In this study, we identify a new feature of the pupylation system by demonstrating that Dop also acts as a depupylase in the Pup proteasome system in vivo and in vitro. Dop removes Pup from substrates by specific cleavage of the isopeptide bond. Depupylation can be enhanced by the unfolding activity of the mycobacterial proteasomal ATPase Mpa.

摘要

蛋白质的翻译后修饰与原核泛素样蛋白(Pup)是细菌中与真核生物中泛素化作用相当的过程。分枝杆菌的 Pup 化作用是一个两步过程,其中 Pup 的羧基末端谷氨酰胺首先被 Dop(Pup 的脱氨酶)脱酰胺化,然后由 Pup 连接酶 PafA 将生成的γ-羧基连接到底物赖氨酸上。在这项研究中,我们通过证明 Dop 在体内和体外的 Pup 蛋白酶体系统中也作为脱 Pup 酶来鉴定 Pup 化系统的一个新特征。Dop 通过特异性切割异肽键从底物中去除 Pup。脱 Pup 作用可以通过分枝杆菌蛋白酶体 ATP 酶 Mpa 的展开活性增强。

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本文引用的文献

1
Prokaryotic ubiquitin-like protein (Pup) is coupled to substrates via the side chain of its C-terminal glutamate.原核泛素样蛋白(Pup)通过其 C 末端谷氨酸的侧链与底物偶联。
J Am Chem Soc. 2010 Apr 28;132(16):5610-2. doi: 10.1021/ja910546x.
2
Prokaryotic ubiquitin-like protein provides a two-part degron to Mycobacterium proteasome substrates.原核生物泛素样蛋白为分枝杆菌蛋白酶体底物提供双部分降解基序。
J Bacteriol. 2010 Jun;192(11):2933-5. doi: 10.1128/JB.01639-09. Epub 2010 Mar 16.
3
The mycobacterial Mpa-proteasome unfolds and degrades pupylated substrates by engaging Pup's N-terminus.分枝杆菌 Mpa 蛋白酶体通过与 Pup 的 N 端结合来展开和降解泛素化底物。
EMBO J. 2010 Apr 7;29(7):1262-71. doi: 10.1038/emboj.2010.23. Epub 2010 Mar 4.
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Ubiquitin-like small archaeal modifier proteins (SAMPs) in Haloferax volcanii.火烈球菌中的泛素样小 archaeal 修饰蛋白(SAMPs)。
Nature. 2010 Jan 7;463(7277):54-60. doi: 10.1038/nature08659.
5
Deletion of dop in Mycobacterium smegmatis abolishes pupylation of protein substrates in vivo.分枝杆菌中的 dop 删除会在体内消除蛋白底物的泛素化。
Mol Microbiol. 2010 Feb;75(3):744-54. doi: 10.1111/j.1365-2958.2009.07013.x. Epub 2009 Dec 16.
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Structural insights on the Mycobacterium tuberculosis proteasomal ATPase Mpa.结核分枝杆菌蛋白酶体 ATP 酶 Mpa 的结构见解。
Structure. 2009 Oct 14;17(10):1377-85. doi: 10.1016/j.str.2009.08.010.
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DUBs at a glance.泛素特异性蛋白酶简介。
J Cell Sci. 2009 Jul 15;122(Pt 14):2325-9. doi: 10.1242/jcs.041046.
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Recognition and processing of ubiquitin-protein conjugates by the proteasome.蛋白酶体对泛素-蛋白质缀合物的识别与加工。
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Bacterial ubiquitin-like modifier Pup is deamidated and conjugated to substrates by distinct but homologous enzymes.细菌类泛素修饰因子Pup通过不同但同源的酶进行脱酰胺作用并与底物结合。
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