Nishimoto Naoki, Yagahara Ayako, Yokooka Yuki, Tsuji Shintaro, Uesugi Masahito, Ogasawara Katsuhiko, Maezawa Masaji
Department of Healthcare Systems Research, Graduate School of Medicine, Hokkaido University, Kita-ku, Kita 15 Nishi 7, Sapporo, Hokkaido, 060-8638, Japan.
Radiol Phys Technol. 2010 Jul;3(2):171-7. doi: 10.1007/s12194-010-0094-x. Epub 2010 May 22.
To investigate the most advanced ontology research in health care and its impact on the radiologic domain, we proposed a concept identification and abstraction technique called "Concept Step". This technique identifies a MeSH term, medical subject headings used in PubMed, in a sentence and climbs up through its hierarchy to reach an abstract concept. We developed original Java software to implement this technique. We tested it on 2,774 abstracts in health-care ontology research retrieved from MEDLINE on 23 October 2008. The total number of MeSH terms was 112,690. We counted a total of 33 MeSH terms (0.029%) in the radiologic domain. The most frequently occurring term was "radiology", which occurred 21 times in the article set. Other frequent terms were "magnetic resonance imaging" and "tomography", the counts of which were 4 and 3, respectively. A pair plot showed no correlation among the MeSH categories "Analytical Diagnostic and Therapeutic Techniques and Equipment", "Anatomy", "Biological Sciences", and "Chemicals and Drugs". We conclude that ontology research is well established in the biomedical domain, and that further study is required in the radiologic domain.
为了研究医疗保健领域最前沿的本体论研究及其对放射学领域的影响,我们提出了一种名为“概念阶梯”的概念识别与抽象技术。该技术在句子中识别出《医学主题词表》(MeSH)中的术语(用于PubMed的医学主题词),并通过其层次结构向上攀升以达到一个抽象概念。我们开发了原创的Java软件来实现这项技术。我们在2008年10月23日从MEDLINE检索到的2774篇医疗保健本体论研究摘要上对其进行了测试。MeSH术语总数为112,690个。我们在放射学领域共统计到33个MeSH术语(占0.029%)。出现频率最高的术语是“放射学”,在文章集中出现了21次。其他常见术语是“磁共振成像”和“断层扫描”,其出现次数分别为4次和3次。成对图显示MeSH类别“分析诊断与治疗技术及设备”、“解剖学”、“生物科学”和“化学药品与药物”之间没有相关性。我们得出结论,本体论研究在生物医学领域已得到充分确立,但在放射学领域仍需要进一步研究。