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漆酶中双氧还原的潜在机制。聚焦于质子转移的结构与建模研究。

Mechanisms underlying dioxygen reduction in laccases. Structural and modelling studies focusing on proton transfer.

作者信息

Bento Isabel, Silva Catarina S, Chen Zhenjia, Martins Lígia O, Lindley Peter F, Soares Cláudio M

机构信息

Instituto de Tecnologia Química e Biológica, Universidade Nova de Lisboa, Oeiras, Portugal.

出版信息

BMC Struct Biol. 2010 Sep 7;10:28. doi: 10.1186/1472-6807-10-28.

Abstract

BACKGROUND

Laccases are enzymes that couple the oxidation of substrates with the reduction of dioxygen to water. They are the simplest members of the multi-copper oxidases and contain at least two types of copper centres; a mononuclear T1 and a trinuclear that includes two T3 and one T2 copper ions. Substrate oxidation takes place at the mononuclear centre whereas reduction of oxygen to water occurs at the trinuclear centre.

RESULTS

In this study, the CotA laccase from Bacillus subtilis was used as a model to understand the mechanisms taking place at the molecular level, with a focus in the trinuclear centre. The structures of the holo-protein and of the oxidised form of the apo-protein, which has previously been reconstituted in vitro with Cu(I), have been determined. The former has a dioxygen moiety between the T3 coppers, while the latter has a monoatomic oxygen, here interpreted as a hydroxyl ion. The UV/visible spectra of these two forms have been analysed in the crystals and compared with the data obtained in solution. Theoretical calculations on these and other structures of CotA were used to identify groups that may be responsible for channelling the protons that are needed for reduction of dioxygen to water.

CONCLUSIONS

These results present evidence that Glu 498 is the only proton-active group in the vicinity of the trinuclear centre. This strongly suggests that this residue may be responsible for channelling the protons needed for the reduction. These results are compared with other data available for these enzymes, highlighting similarities and differences within laccases and multicopper oxidases.

摘要

背景

漆酶是一类能将底物氧化与将双氧还原为水的过程偶联起来的酶。它们是多铜氧化酶中最简单的成员,至少包含两种类型的铜中心:一个单核T1中心和一个三核中心,该三核中心包含两个T3铜离子和一个T2铜离子。底物氧化发生在单核中心,而氧还原为水则发生在三核中心。

结果

在本研究中,以枯草芽孢杆菌的CotA漆酶为模型来理解分子水平上发生的机制,重点关注三核中心。已确定了全酶蛋白以及脱辅基蛋白氧化形式(此前已在体外与Cu(I)重构)的结构。前者在T3铜离子之间有一个双氧部分,而后者有一个单原子氧,在此解释为一个氢氧根离子。已在晶体中分析了这两种形式的紫外/可见光谱,并与在溶液中获得的数据进行了比较。对CotA的这些及其他结构进行的理论计算用于确定可能负责将氧还原为水所需质子进行传递的基团。

结论

这些结果表明,Glu 498是三核中心附近唯一的质子活性基团。这强烈表明该残基可能负责传递还原所需的质子。将这些结果与这些酶的其他可用数据进行了比较,突出了漆酶和多铜氧化酶之间的异同。

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