Genomics Core Unit, European Molecular Biology Laboratory, Heidelberg, Federal Republic of Germany.
PLoS One. 2010 Sep 7;5(9):e12542. doi: 10.1371/journal.pone.0012542.
Numerous responses are triggered by light in the cell. How the light signal is detected and transduced into a cellular response is still an enigma. Each zebrafish cell has the capacity to directly detect light, making this organism particularly suitable for the study of light dependent transcription. To gain insight into the light signalling mechanism we identified genes that are activated by light exposure at an early embryonic stage, when specialised light sensing organs have not yet formed. We screened over 14,900 genes using micro-array GeneChips, and identified 19 light-induced genes that function primarily in light signalling, stress response, and DNA repair. Here we reveal that PAR Response Elements are present in all promoters of the light-induced genes, and demonstrate a pivotal role for the PAR bZip transcription factor Thyrotroph embryonic factor (Tef) in regulating the majority of light-induced genes. We show that tefbeta transcription is directly regulated by light while transcription of tefalpha is under circadian clock control at later stages of development. These data leads us to propose their involvement in light-induced UV tolerance in the zebrafish embryo.
细胞中会因光照而引发大量反应。然而,目前人们仍然不清楚光信号是如何被探测并转化为细胞反应的。每一个斑马鱼细胞都有直接探测光的能力,这使得这种生物特别适合用于研究依赖于光的转录。为了深入了解光信号机制,我们在早期胚胎阶段(此时专门的光感应器官尚未形成),通过微阵列基因芯片筛选了超过 14900 个基因,鉴定出了 19 个主要参与光信号转导、应激反应和 DNA 修复的光诱导基因。在这里,我们发现所有光诱导基因的启动子中都存在 PAR 反应元件,并且证明了 PAR bZip 转录因子 Thyrotroph embryonic factor (Tef) 在调节大多数光诱导基因中的关键作用。我们表明,tefbeta 的转录直接受到光照调控,而 tefalpha 的转录则在发育后期受到昼夜节律钟的控制。这些数据使我们提出它们可能参与了斑马鱼胚胎中的光诱导 UV 耐受。