Department of Medical Biotechnology, School of Medicine, Flinders University, Bedford Park SA 5042, Australia.
Int J Syst Evol Microbiol. 2011 Sep;61(Pt 9):2135-2140. doi: 10.1099/ijs.0.026757-0. Epub 2010 Oct 1.
A novel endophytic actinobacterium, designated strain EUM 378(T), was isolated from the surface-sterilized root tissue of Eucalyptus microcarpa, a eucalyptus tree known as Grey Box. Phylogenetic evaluation based on 16S rRNA gene sequence analysis, including alignment with taxon-specific 16S rRNA gene signature nucleotides, placed this isolate as a member of the family Nocardioidaceae. Strain EUM 378(T) showed >5.5 % 16S rRNA gene sequence divergence from other members of this family and was related most closely to Actinopolymorpha alba YIM 48868(T) (94.2 %) and Actinopolymorpha singaporensis IM 7744(T) (94.4 %). This Gram-positive, aerobic actinobacterium has well-developed substrate mycelia that fragment into small rods. Chemotaxonomic data revealed that the cell wall contains LL-diaminopimelic acid, ribose, glucose and rhamnose. MK-10(H₆) is the predominant menaquinone. Chemotaxonomic and phylogenetic evidence confirmed that strain EUM 378(T) represents a novel species of a new genus, for which the name Flindersiella endophytica gen. nov., sp. nov. is proposed. The type strain is EUM 378(T) ( = DSM 45355(T) = ACM 5289(T)).
一株新型内生放线菌,命名为菌株 EUM 378(T),从灰箱桉树(一种桉树)的表面消毒根组织中分离得到。基于 16S rRNA 基因序列分析的系统发育评估,包括与分类特异性 16S rRNA 基因特征核苷酸的比对,将该分离物鉴定为诺卡氏菌科的成员。菌株 EUM 378(T)与该科的其他成员的 16S rRNA 基因序列差异>5.5%,与白 Actinopolymorpha alba YIM 48868(T)(94.2%)和新加坡 Actinopolymorpha singaporensis IM 7744(T)(94.4%)最为密切相关。该革兰氏阳性、需氧放线菌具有发育良好的基质菌丝,可分裂成小棒。化学生态数据表明,细胞壁含有 LL-二氨基庚二酸、核糖、葡萄糖和鼠李糖。MK-10(H₆) 是主要的menaquinone。化学生态学和系统发育证据证实,菌株 EUM 378(T) 代表一个新属的新型种,建议将其命名为 Flindersiella endophytica gen. nov.,sp. nov.。模式菌株为 EUM 378(T)(=DSM 45355(T)=ACM 5289(T))。