Abteilung Molekulare Genetik und Präparative Molekularbiologie, Institut für Mikrobiologie und Genetik, Georg-August-Universität Göttingen, Grisebachstr, 8, D-37077 Göttingen, Germany.
BMC Microbiol. 2010 Sep 29;10:251. doi: 10.1186/1471-2180-10-251.
The inner membrane-anchored periplasmic folding factor PpiD is described as a parvulin-like peptidyl prolyl isomerase (PPIase) that assists in the maturation of the major beta-barrel outer membrane proteins (OMPs) of Escherichia coli. More recent work however, calls these findings into question. Here, we re-examined the role of PpiD in the E. coli periplasm by analyzing its functional interplay with other folding factors that influence OMP maturation as well as general protein folding in the periplasmic compartment of the cell, such as SurA, Skp, and DegP.
The analysis of the effects of both deletion and overexpression of ppiD on cell envelope phenotypes revealed that PpiD in contrast to prior observations plays only a minor role, if any, in the maturation of OMPs and cannot compensate for the lack of SurA in the periplasm. On the other hand, our results show that overproduction of PpiD rescues a surA skp double mutant from lethality. In the presence of increased PpiD levels surA skp cells show reduced activities of both the SigmaE-dependent and the Cpx envelope stress responses, and contain increased amounts of folded species of the major OMP OmpA. These effects require the anchoring of PpiD in the inner membrane but are independent of its parvulin-like PPIase domain. Moreover, a PpiD protein lacking the PPIase domain also complements the growth defects of an fkpA ppiD surA triple PPIase mutant and exhibits chaperone activity in vitro. In addition, PpiD appears to collaborate with DegP, as deletion of ppiD confers a temperature-dependent conditional synthetic phenotype in a degP mutant.
This study provides first direct evidence that PpiD functions as a chaperone and contributes to the network of periplasmic chaperone activities without being specifically involved in OMP maturation. Consistent with previous work, our data support a model in which the chaperone function of PpiD is used to aid in the early periplasmic folding of many newly translocated proteins.
内膜锚定的周质折叠因子 PpiD 被描述为一种 parvulin 样肽基脯氨酰顺反异构酶(PPIase),可协助大肠杆菌主要β-桶状外膜蛋白(OMP)的成熟。然而,最近的研究对这些发现提出了质疑。在这里,我们通过分析 PpiD 与影响 OMP 成熟以及影响细胞周质腔中一般蛋白质折叠的其他折叠因子(如 SurA、Skp 和 DegP)的功能相互作用,重新研究了 PpiD 在大肠杆菌周质中的作用。
分析 ppiD 的缺失和过表达对细胞包膜表型的影响表明,与先前的观察结果相反,PpiD 仅在 OMP 的成熟中发挥很小的作用(如果有的话),并且不能弥补 SurA 在周质中的缺失。另一方面,我们的结果表明,PpiD 的过表达可使 surA skp 双突变体免于致死。在 PpiD 水平升高的情况下,surA skp 细胞显示出 SigmaE 依赖性和 Cpx 包膜应激反应的活性降低,并且含有更多的主要 OMP OmpA 的折叠形式。这些影响需要 PpiD 在内膜中的锚定,但不依赖于其 parvulin 样 PPIase 结构域。此外,缺乏 PPIase 结构域的 PpiD 蛋白也可弥补 fkpA ppiD surA 三重 PPIase 突变体的生长缺陷,并在体外表现出伴侣活性。此外,PpiD 似乎与 DegP 合作,因为 ppiD 的缺失赋予了 degP 突变体在温度依赖性条件下的合成表型。
这项研究首次直接证明 PpiD 作为伴侣发挥作用,并有助于周质伴侣活性网络,而不专门参与 OMP 成熟。与先前的工作一致,我们的数据支持这样一种模型,即 PpiD 的伴侣功能用于帮助许多新易位的蛋白质在早期周质中折叠。