Department of Horticultural Sciences, University of Florida, Gainesville, Florida 32611, USA.
J Biol Chem. 2010 Dec 31;285(53):41557-66. doi: 10.1074/jbc.M110.190504. Epub 2010 Oct 15.
5-Formyltetrahydrofolate (5-CHO-THF) is formed by a side reaction of serine hydroxymethyltransferase. Unlike other folates, it is not a one-carbon donor but a potent inhibitor of folate enzymes and must therefore be metabolized. Only 5-CHO-THF cycloligase (5-FCL) is generally considered to do this. However, comparative genomic analysis indicated (i) that certain prokaryotes lack 5-FCL, implying that they have an alternative 5-CHO-THF-metabolizing enzyme, and (ii) that the histidine breakdown enzyme glutamate formiminotransferase (FT) might moonlight in this role. A functional complementation assay for 5-CHO-THF metabolism was developed in Escherichia coli, based on deleting the gene encoding 5-FCL (ygfA). The deletion mutant accumulated 5-CHO-THF and, with glycine as sole nitrogen source, showed a growth defect; both phenotypes were complemented by bacterial or archaeal genes encoding FT. Furthermore, utilization of supplied 5-CHO-THF by Streptococcus pyogenes was shown to require expression of the native FT. Recombinant bacterial and archaeal FTs catalyzed formyl transfer from 5-CHO-THF to glutamate, with k(cat) values of 0.1-1.2 min(-1) and K(m) values for 5-CHO-THF and glutamate of 0.4-5 μM and 0.03-1 mM, respectively. Although the formyltransferase activities of these proteins were far lower than their formiminotransferase activities, the K(m) values for both substrates relative to their intracellular levels in prokaryotes are consistent with significant in vivo flux through the formyltransferase reaction. Collectively, these data indicate that FTs functionally replace 5-FCL in certain prokaryotes.
5-甲酰四氢叶酸(5-CHO-THF)是由丝氨酸羟甲基转移酶的副反应形成的。与其他叶酸不同,它不是一碳供体,而是叶酸酶的强抑制剂,因此必须代谢。一般认为只有 5-CHO-THF 环化酶(5-FCL)可以做到这一点。然而,比较基因组分析表明:(i)某些原核生物缺乏 5-FCL,这意味着它们有替代的 5-CHO-THF 代谢酶;(ii)组氨酸分解酶谷氨酸形式氨甲酰转移酶(FT)可能在这个角色中兼职。基于删除编码 5-FCL(ygfA)的基因,在大肠杆菌中开发了 5-CHO-THF 代谢的功能互补测定法。缺失突变体积累了 5-CHO-THF,并且仅以甘氨酸作为氮源时显示出生长缺陷;这两种表型都可以通过细菌或古细菌编码 FT 的基因来互补。此外,表明酿脓链球菌利用供应的 5-CHO-THF 需要表达天然的 FT。重组细菌和古细菌 FT 催化从 5-CHO-THF 到谷氨酸的甲酰基转移,kcat 值为 0.1-1.2 min-1,5-CHO-THF 和谷氨酸的 K m 值分别为 0.4-5 μM 和 0.03-1 mM。尽管这些蛋白质的甲酰基转移酶活性远低于其甲氨酰基转移酶活性,但相对于原核生物中两种底物的细胞内水平,其 K m 值对于甲酰基转移酶反应中的显著体内通量是一致的。总的来说,这些数据表明 FT 在某些原核生物中在功能上替代了 5-FCL。