• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

分析复制谱揭示 RFC-Ctf18 在酵母复制应激反应中的关键作用。

Analysis of replication profiles reveals key role of RFC-Ctf18 in yeast replication stress response.

机构信息

Institute of Human Genetics, Centre National de Recherche Scientifique, Unité Propre de Recherche 1142, Montpellier, France.

出版信息

Nat Struct Mol Biol. 2010 Nov;17(11):1391-7. doi: 10.1038/nsmb.1932. Epub 2010 Oct 24.

DOI:10.1038/nsmb.1932
PMID:20972444
Abstract

Maintenance of genome integrity relies on surveillance mechanisms that detect and signal arrested replication forks. Although evidence from budding yeast indicates that the DNA replication checkpoint (DRC) is primarily activated by single-stranded DNA (ssDNA), studies in higher eukaryotes have implicated primer ends in this process. To identify factors that signal primed ssDNA in Saccharomyces cerevisiae, we have screened a collection of checkpoint mutants for their ability to activate the DRC, using the repression of late origins as readout for checkpoint activity. This quantitative analysis reveals that neither RFC(Rad24) and the 9-1-1 clamp nor the alternative clamp loader RFC(Elg1) is required to signal paused forks. In contrast, we found that RFC(Ctf18) is essential for the Mrc1-dependent activation of Rad53 and for the maintenance of paused forks. These data identify RFC(Ctf18) as a key DRC mediator, potentially bridging Mrc1 and primed ssDNA to signal paused forks.

摘要

基因组完整性的维持依赖于能够检测和发出信号的监控机制,以阻止复制叉的停滞。尽管来自 budding yeast 的证据表明,DNA 复制检查点(DRC)主要通过单链 DNA(ssDNA)激活,但在高等真核生物中的研究表明引物末端也参与了这个过程。为了鉴定在 Saccharomyces cerevisiae 中发出引物 ssDNA 的信号因子,我们使用迟滞起始点的抑制作为检查点活性的读数,筛选了一组检查点突变体,以检测它们激活 DRC 的能力。这种定量分析表明,RFC(Rad24)和 9-1-1 夹以及替代的夹加载器 RFC(Elg1)都不需要发出停滞的叉信号。相比之下,我们发现 RFC(Ctf18)对于 Mrc1 依赖性的 Rad53 激活和停滞叉的维持是必需的。这些数据表明,RFC(Ctf18)是 DRC 中介的关键,可能将 Mrc1 和引物 ssDNA 桥接起来,以发出停滞的叉信号。

相似文献

1
Analysis of replication profiles reveals key role of RFC-Ctf18 in yeast replication stress response.分析复制谱揭示 RFC-Ctf18 在酵母复制应激反应中的关键作用。
Nat Struct Mol Biol. 2010 Nov;17(11):1391-7. doi: 10.1038/nsmb.1932. Epub 2010 Oct 24.
2
New functions of Ctf18-RFC in preserving genome stability outside its role in sister chromatid cohesion.Ctf18-RFC 在保持姐妹染色单体黏合以外的基因组稳定性方面的新功能。
PLoS Genet. 2011 Feb 10;7(2):e1001298. doi: 10.1371/journal.pgen.1001298.
3
A conserved Polϵ binding module in Ctf18-RFC is required for S-phase checkpoint activation downstream of Mec1.Ctf18-RFC 中的一个保守的 Polϵ 结合模块对于 Mec1 下游的 S 期检验点激活是必需的。
Nucleic Acids Res. 2015 Oct 15;43(18):8830-8. doi: 10.1093/nar/gkv799. Epub 2015 Aug 6.
4
Elg1 forms an alternative RFC complex important for DNA replication and genome integrity.Elg1形成一种对DNA复制和基因组完整性很重要的替代复制因子C复合物。
EMBO J. 2003 Aug 15;22(16):4304-13. doi: 10.1093/emboj/cdg406.
5
Chl12 (Ctf18) forms a novel replication factor C-related complex and functions redundantly with Rad24 in the DNA replication checkpoint pathway.Chl12(Ctf18)形成一种新型的复制因子C相关复合物,并在DNA复制检查点途径中与Rad24发挥冗余功能。
Mol Cell Biol. 2001 Sep;21(17):5838-45. doi: 10.1128/MCB.21.17.5838-5845.2001.
6
Quantitative proteomic analysis of chromatin reveals that Ctf18 acts in the DNA replication checkpoint.染色质的定量蛋白质组分析表明 Ctf18 作用于 DNA 复制检查点。
Mol Cell Proteomics. 2011 Jul;10(7):M110.005561. doi: 10.1074/mcp.M110.005561. Epub 2011 Apr 19.
7
Ctf18-RFC and DNA Pol ϵ form a stable leading strand polymerase/clamp loader complex required for normal and perturbed DNA replication.Ctf18-RFC 和 DNA 聚合酶 ϵ 形成一个稳定的前导链聚合酶/夹取器加载器复合物,这是正常和受干扰的 DNA 复制所必需的。
Nucleic Acids Res. 2020 Aug 20;48(14):8128-8145. doi: 10.1093/nar/gkaa541.
8
Elg1 forms an alternative PCNA-interacting RFC complex required to maintain genome stability.Elg1形成一种维持基因组稳定性所需的替代性增殖细胞核抗原相互作用因子相关复合物。
Curr Biol. 2003 Sep 16;13(18):1583-95. doi: 10.1016/s0960-9822(03)00578-5.
9
The ELG1 clamp loader plays a role in sister chromatid cohesion.ELG1钳位装载蛋白在姐妹染色单体黏连中发挥作用。
PLoS One. 2009;4(5):e5497. doi: 10.1371/journal.pone.0005497. Epub 2009 May 11.
10
Mrc1 is required for normal progression of replication forks throughout chromatin in S. cerevisiae.在酿酒酵母中,Mrc1是染色质上复制叉正常推进所必需的。
Mol Cell. 2005 Sep 2;19(5):691-7. doi: 10.1016/j.molcel.2005.06.037.

引用本文的文献

1
Structure of the human CTF18-RFC clamp loader bound to PCNA.与增殖细胞核抗原(PCNA)结合的人CTF18-RFC钳式装载器的结构。
bioRxiv. 2025 Jul 24:2024.05.08.593111. doi: 10.1101/2024.05.08.593111.
2
A Rfa1-MN-based system reveals new factors involved in the rescue of broken replication forks.一种基于Rfa1-MN的系统揭示了参与修复断裂复制叉的新因子。
PLoS Genet. 2025 Apr 1;21(4):e1011405. doi: 10.1371/journal.pgen.1011405. eCollection 2025 Apr.
3
DNA lesions can frequently precede DNA:RNA hybrid accumulation.DNA损伤常常先于DNA:RNA杂交体的积累出现。

本文引用的文献

1
Galaxy: a web-based genome analysis tool for experimentalists.Galaxy:一款面向实验人员的基于网络的基因组分析工具。
Curr Protoc Mol Biol. 2010 Jan;Chapter 19:Unit 19.10.1-21. doi: 10.1002/0471142727.mb1910s89.
2
Molecular analysis of the replication program in unicellular model organisms.单细胞模式生物中复制程序的分子分析。
Chromosome Res. 2010 Jan;18(1):19-34. doi: 10.1007/s10577-009-9099-x.
3
Topoisomerase I suppresses genomic instability by preventing interference between replication and transcription.拓扑异构酶I通过防止复制和转录之间的干扰来抑制基因组不稳定。
Nat Commun. 2025 Mar 10;16(1):2401. doi: 10.1038/s41467-025-57588-x.
4
Replication-IDentifier links epigenetic and metabolic pathways to the replication stress response.复制标识符将表观遗传和代谢途径与复制应激反应联系起来。
Nat Commun. 2025 Feb 6;16(1):1416. doi: 10.1038/s41467-025-56561-y.
5
Mechanism of PCNA loading by Ctf18-RFC for leading-strand DNA synthesis.Ctf18-RFC介导的增殖细胞核抗原(PCNA)加载机制用于前导链DNA合成。
Science. 2024 Aug 2;385(6708):eadk5901. doi: 10.1126/science.adk5901.
6
The Ty1 retrotransposon harbors a DNA region that performs dual functions as both a gene silencing and chromatin insulator.Ty1 反转录转座子含有一个 DNA 区域,该区域具有双重功能,既能作为基因沉默元件,又能作为染色质绝缘子。
Sci Rep. 2024 Jul 18;14(1):16641. doi: 10.1038/s41598-024-67242-z.
7
Cryo-EM reveals a nearly complete PCNA loading process and unique features of the human alternative clamp loader CTF18-RFC.低温电镜揭示了一个近乎完整的 PCNA 加载过程和人类替代 clamp loader CTF18-RFC 的独特特征。
Proc Natl Acad Sci U S A. 2024 Apr 30;121(18):e2319727121. doi: 10.1073/pnas.2319727121. Epub 2024 Apr 26.
8
Nuclear pore complexes mediate subtelomeric gene silencing by regulating PCNA levels on chromatin.核孔复合物通过调节染色质上 PCNA 的水平来介导端粒基因沉默。
J Cell Biol. 2023 Sep 4;222(9). doi: 10.1083/jcb.202207060. Epub 2023 Jun 26.
9
The Fork Protection Complex: A Regulatory Hub at the Head of the Replisome.叉保护复合体:复制体头部的调控中心
Subcell Biochem. 2022;99:83-107. doi: 10.1007/978-3-031-00793-4_3.
10
Unexpected new insights into DNA clamp loaders: Eukaryotic clamp loaders contain a second DNA site for recessed 5' ends that facilitates repair and signals DNA damage: Eukaryotic clamp loaders contain a second DNA site for recessed 5' ends that facilitates repair and signals DNA damage.出乎意料的新见解:真核夹钳加载器包含第二个 DNA 凹陷 5' 端结合位点,有助于修复并发出 DNA 损伤信号:真核夹钳加载器包含第二个 DNA 凹陷 5' 端结合位点,有助于修复并发出 DNA 损伤信号。
Bioessays. 2022 Nov;44(11):e2200154. doi: 10.1002/bies.202200154. Epub 2022 Sep 18.
Nat Cell Biol. 2009 Nov;11(11):1315-24. doi: 10.1038/ncb1984. Epub 2009 Oct 18.
4
Csm3, Tof1, and Mrc1 form a heterotrimeric mediator complex that associates with DNA replication forks.Csm3、Tof1和Mrc1形成一种与DNA复制叉相关联的异源三聚体介导复合物。
J Biol Chem. 2009 Dec 4;284(49):34355-65. doi: 10.1074/jbc.M109.065730. Epub 2009 Oct 8.
5
The Integrated Genome Browser: free software for distribution and exploration of genome-scale datasets.整合基因组浏览器:用于发布和探索基因组数据集的免费软件。
Bioinformatics. 2009 Oct 15;25(20):2730-1. doi: 10.1093/bioinformatics/btp472. Epub 2009 Aug 4.
6
DNA replication as a target of the DNA damage checkpoint.作为DNA损伤检查点靶点的DNA复制
DNA Repair (Amst). 2009 Sep 2;8(9):1077-88. doi: 10.1016/j.dnarep.2009.04.023. Epub 2009 Jun 7.
7
The checkpoint response to replication stress.对复制应激的检查点反应。
DNA Repair (Amst). 2009 Sep 2;8(9):1038-46. doi: 10.1016/j.dnarep.2009.04.014. Epub 2009 May 23.
8
Perspectives on the DNA damage and replication checkpoint responses in Saccharomyces cerevisiae.酿酒酵母中DNA损伤与复制检查点反应的研究视角
DNA Repair (Amst). 2009 Sep 2;8(9):974-82. doi: 10.1016/j.dnarep.2009.04.021. Epub 2009 May 27.
9
Genome-wide replication profiles indicate an expansive role for Rpd3L in regulating replication initiation timing or efficiency, and reveal genomic loci of Rpd3 function in Saccharomyces cerevisiae.全基因组复制图谱表明Rpd3L在调节复制起始时间或效率方面发挥着广泛作用,并揭示了酿酒酵母中Rpd3功能的基因组位点。
Genes Dev. 2009 May 1;23(9):1077-90. doi: 10.1101/gad.1784309.
10
Differential regulation of homologous recombination at DNA breaks and replication forks by the Mrc1 branch of the S-phase checkpoint.S期检查点的Mrc1分支对DNA断裂处和复制叉处同源重组的差异调控。
EMBO J. 2009 Apr 22;28(8):1131-41. doi: 10.1038/emboj.2009.75. Epub 2009 Mar 26.