Laboratori de Microbiologia, Facultat de Farmacia, Universitat de Barcelona, Av. Joan XXIII s/n, 08028 Barcelona, Spain.
Int J Syst Evol Microbiol. 2011 Oct;61(Pt 10):2401-2405. doi: 10.1099/ijs.0.024919-0. Epub 2010 Nov 5.
During the taxonomic investigation of cold-adapted bacteria from samples collected in the Antarctic area of the South Shetland Islands, one Gram-reaction-negative, psychrotolerant, aerobic bacterium, designated strain M1(T), was isolated from marine sediment collected on Deception Island. The organism was rod-shaped, catalase- and oxidase-positive and motile by means of a polar flagellum. This psychrotolerant strain grew at temperatures ranging from -4 °C to 34 °C. Phylogenetic studies based on 16S rRNA gene sequences confirmed that Antarctic isolate M1(T) was a member of the genus Pseudomonas and was located in the Pseudomonas fragi cluster. 16S rRNA gene sequence similarity values were >98 % between 13 type strains belonging to the Pseudomonas fluorescens lineage. However, phylogenetic analysis of rpoD gene sequences showed that strain M1(T) exhibited high sequence similarity only with respect to Pseudomonas psycrophila (97.42 %) and P. fragi (96.40 %) and DNA-DNA hybridization experiments between the Antarctic isolate M1(T) and the type strains of these two closely related species revealed relatedness values of 58 and 57 %, respectively. Several phenotypic characteristics, together with the results of polar lipid and cellular fatty acid analyses, were used to differentiate strain M1(T) from related pseudomonads. Based on the evidence of this polyphasic taxonomic study, strain M1(T) represents a novel species, for which the name Pseudomonas deceptionensis sp. nov. is proposed. The type strain is M1(T) ( = LMG 25555(T) = CECT 7677(T)).
在对南设得兰群岛南极地区采集的样本中的耐冷细菌进行分类学调查时,从欺骗岛海洋沉积物中分离到一株革兰氏反应阴性、嗜冷、需氧的细菌,命名为 M1(T) 株。该菌呈杆状,过氧化氢酶和氧化酶阳性,通过极生鞭毛运动。该耐冷菌株在-4°C 到 34°C 的温度范围内生长。基于 16S rRNA 基因序列的系统发育研究证实,南极分离株 M1(T) 是假单胞菌属的成员,位于脆弱假单胞菌群中。属于荧光假单胞菌谱系的 13 个模式菌株的 16S rRNA 基因序列相似性值>98%。然而,rpoD 基因序列的系统发育分析表明,M1(T) 株与假单胞菌属的两个密切相关的种表现出较高的序列相似性,与嗜冷假单胞菌(97.42%)和脆弱假单胞菌(96.40%)的相似性最高,与这两个近缘种的模式菌株的 DNA-DNA 杂交实验显示出 58%和 57%的同源性。几个表型特征,以及极性脂和细胞脂肪酸分析的结果,用于将 M1(T) 株与相关的假单胞菌区分开来。基于多相分类学研究的证据,M1(T) 株代表一个新的种,命名为欺骗岛假单胞菌新种。其模式菌株为 M1(T)(=LMG 25555(T)=CECT 7677(T))。