Suppr超能文献

sp. nov.,一种从南设得兰群岛乔治王岛的南极土壤中分离出来的耐冷细菌。

sp. nov., a psychrotolerant bacterium isolated from Antarctic soil of King George Island, South Shetland Islands.

机构信息

Laboratorio de Genética e Inmunología Molecular, Instituto de Biología, Pontificia Universidad Católica de Valparaíso, Avenida Universidad 330, Valparaíso, Chile.

IRHS, Agrocampus-Ouest, INRA, Université d'Angers, SFR 4207 QuaSaV, 49071, Beaucouzé, France.

出版信息

Int J Syst Evol Microbiol. 2020 May;70(5):3255-3263. doi: 10.1099/ijsem.0.004165. Epub 2020 Apr 24.

Abstract

The strain KG01 was isolated from a soil sample from King George Island, Antarctica. Cells of KG01 are rod-shaped and motile by means of multiple polar flagella. The absence of arginine dihydrolase activity could be a key feature to readily distinguish KG01 from its closest phylogenetic relative species. The main fatty acids of the strain include summed feature 3 (C ω7 and/or C iso 2-OH), C and C ω7. Phylogenetic analysis based on the 16S rRNA gene sequence and on a multilocus sequence analysis (MLSA) using housekeeping genes (16S rRNA) were carried out. These analyses allowed us to include the strain within the group, presenting the highest similarity of multilocus sequence with LMG 17761 (96.67 %). The genome of KG01 was sequenced and compared with genomes of the most closely related species of the scens group. The average nucleotide identity (ANIb) and average amino acid identity (AAI) values of the species phylogenetically closest to KG01 were less than 95-96 %, threshold currently accepted to define strain as belonging to a bacterial species, the highest scores being those to LMG 17761 (87.98 %) and ICMP 3553 (91.90 %). Therefore, the phenotypic and genotypic analyses results, allow us to propose that KG01 represents a member of a novel species of the genus , for which the name is proposed, and KG01 (=CECT 9084;=DSM 102036) is established as the type strain .

摘要

该菌株 KG01 是从南极洲乔治王岛的土壤样本中分离出来的。KG01 细胞呈杆状,通过多个极生鞭毛运动。精氨酸二氢酶活性的缺失可能是将 KG01 与其最接近的系统发育相关的物种区分开来的关键特征。该菌株的主要脂肪酸包括总和特征 3(C ω7 和/或 C iso 2-OH)、C 和 C ω7。基于 16S rRNA 基因序列和使用管家基因(16S rRNA)的多位点序列分析(MLSA)进行了菌株的系统发育分析。这些分析使我们能够将该菌株归入 组,与 LMG 17761(96.67%)的多位点序列相似度最高。对 KG01 的基因组进行了测序,并与 scens 组中最接近的物种的基因组进行了比较。与 KG01 亲缘关系最密切的物种的平均核苷酸同一性(ANIb)和平均氨基酸同一性(AAI)值小于 95-96%,目前公认的将菌株定义为属于细菌物种的阈值,最高分数是那些与 LMG 17761(87.98%)和 ICMP 3553(91.90%)。因此,表型和基因型分析结果表明,KG01 代表了一个新的属的一个新种的成员,提出了 的名称,KG01(=CECT 9084;=DSM 102036)被确立为模式菌株 。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验