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多头绒泡菌同步行为的出现及其粒子近似

The emergence of synchronization behavior in Physarum polycephalum and its particle approximation.

作者信息

Tsuda Soichiro, Jones Jeff

机构信息

Bristol Institute of Technology, University of the West of England, United Kingdom.

出版信息

Biosystems. 2011 Mar;103(3):331-41. doi: 10.1016/j.biosystems.2010.11.001. Epub 2010 Nov 9.

Abstract

The regeneration process of contractile oscillation in the plasmodium of Physarum polycephalum is investigated experimentally and modelled computationally. When placed in a well, the Physarum cell restructures the body (fusion of small granule-like cells) and shows various complex oscillation patterns. After it completed the restructuring and regained synchronized oscillation within the body, the cell shows bilateral oscillation or rotating wave pattern. This regeneration process did not depend on the well size and all the cases tested here showed similar time course. Phase synchronization analysis based on Hilbert Transform also suggested that the cell can develop a fully synchronized oscillation within a fixed time no matter what the cell size is. A particle-based computational model was developed in order to model the emergence of oscillation patterns. Particles employing very simple and identical sensory and motor behaviors interacted with each other via the sensing and deposition of chemoattractants in a diffusive environment. From a random and almost homogeneous distribution, emergent domains of oscillatory activity emerged. By increasing the sensory radius the model simulated the regeneration process of the real plasmodium. In addition, the model replicated the rotating wave and bilateral oscillation pattern when the sensory radius was increased. The results suggest that complex emergent oscillatory behaviors (and thus the high-level systems which may utilize them, such as pumping and transport mechanisms) may be developed from simple materials inspired by Physarum slime mold.

摘要

对多头绒泡菌原质团中收缩振荡的再生过程进行了实验研究,并进行了计算建模。当置于培养皿中时,多头绒泡菌细胞会重构身体(小颗粒状细胞融合)并呈现出各种复杂的振荡模式。在完成重构并在体内重新获得同步振荡后,细胞会呈现双侧振荡或旋转波模式。这种再生过程不依赖于培养皿大小,此处测试的所有情况都显示出相似的时间进程。基于希尔伯特变换的相位同步分析还表明,无论细胞大小如何,细胞都能在固定时间内形成完全同步的振荡。为了模拟振荡模式的出现,开发了一个基于粒子的计算模型。采用非常简单且相同的传感和运动行为的粒子在扩散环境中通过趋化因子的传感和沉积相互作用。从随机且几乎均匀的分布中,出现了振荡活动的新兴区域。通过增加传感半径,该模型模拟了真实原质团的再生过程。此外,当传感半径增加时,该模型复制了旋转波和双侧振荡模式。结果表明,复杂的新兴振荡行为(以及可能利用它们的高级系统,如泵送和运输机制)可能由受多头绒泡菌黏液霉菌启发的简单物质发展而来。

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