Research & Development, The Forensic Science Service, 2960 Trident Court, Birmingham Business Park, Solihull Parkway, Birmingham B37 7YN, UK.
Forensic Sci Int Genet. 2011 Nov;5(5):436-48. doi: 10.1016/j.fsigen.2010.09.004. Epub 2010 Nov 10.
In response to the ENFSI and EDNAP groups' call for new STR multiplexes for Europe, Promega(®) developed a suite of four new DNA profiling kits. This paper describes the developmental validation study performed on the PowerPlex(®) ESI 16 (European Standard Investigator 16) and the PowerPlex(®) ESI 17 Systems. The PowerPlex(®) ESI 16 System combines the 11 loci compatible with the UK National DNA Database(®), contained within the AmpFlSTR(®) SGM Plus(®) PCR Amplification Kit, with five additional loci: D2S441, D10S1248, D22S1045, D1S1656 and D12S391. The multiplex was designed to reduce the amplicon size of the loci found in the AmpFlSTR(®) SGM Plus(®) kit. This design facilitates increased robustness and amplification success for the loci used in the national DNA databases created in many countries, when analyzing degraded DNA samples. The PowerPlex(®) ESI 17 System amplifies the same loci as the PowerPlex(®) ESI 16 System, but with the addition of a primer pair for the SE33 locus. Tests were designed to address the developmental validation guidelines issued by the Scientific Working Group on DNA Analysis Methods (SWGDAM), and those of the DNA Advisory Board (DAB). Samples processed include DNA mixtures, PCR reactions spiked with inhibitors, a sensitivity series, and 306 United Kingdom donor samples to determine concordance with data generated with the AmpFlSTR(®) SGM Plus(®) kit. Allele frequencies from 242 white Caucasian samples collected in the United Kingdom are also presented. The PowerPlex(®) ESI 16 and ESI 17 Systems are robust and sensitive tools, suitable for the analysis of forensic DNA samples. Full profiles were routinely observed with 62.5pg of a fully heterozygous single source DNA template. This high level of sensitivity was found to impact on mixture analyses, where 54-86% of unique minor contributor alleles were routinely observed in a 1:19 mixture ratio. Improved sensitivity combined with the robustness afforded by smaller amplicons has substantially improved the quantity of data obtained from degraded samples, and the improved chemistry confers exceptional tolerance to high levels of laboratory prepared inhibitors.
针对 ENFSI 和 EDNAP 小组呼吁为欧洲开发新的 STR 多重扩增试剂盒,Promega(®)开发了一套四个新的 DNA 分析试剂盒。本文描述了对 PowerPlex(®)ESI 16(欧洲标准调查员 16)和 PowerPlex(®)ESI 17 系统进行的开发验证研究。PowerPlex(®)ESI 16 系统结合了与英国国家 DNA 数据库(®)兼容的 11 个基因座,包含在 AmpFlSTR(®)SGM Plus(®)PCR 扩增试剂盒中,另外还有 5 个基因座:D2S441、D10S1248、D22S1045、D1S1656 和 D12S391。该多重扩增试剂盒旨在减小 AmpFlSTR(®)SGM Plus(®)试剂盒中发现的基因座的扩增子大小。这种设计有助于提高在许多国家创建的国家 DNA 数据库中使用的基因座的稳健性和扩增成功率,同时分析降解的 DNA 样本。PowerPlex(®)ESI 17 系统扩增与 PowerPlex(®)ESI 16 系统相同的基因座,但增加了一个用于 SE33 基因座的引物对。测试旨在解决由 DNA 分析方法科学工作组(SWGDAM)和 DNA 咨询委员会(DAB)发布的开发验证指南。处理的样本包括 DNA 混合物、添加抑制剂的 PCR 反应、灵敏度系列和 306 个英国供体样本,以确定与使用 AmpFlSTR(®)SGM Plus(®)试剂盒生成的数据的一致性。还提供了从英国收集的 242 个白种高加索样本的等位基因频率。PowerPlex(®)ESI 16 和 ESI 17 系统是强大且敏感的工具,适用于法医 DNA 样本的分析。在 62.5pg 完全杂合的单源 DNA 模板上,可常规观察到完整图谱。这种高灵敏度被发现对混合物分析有影响,在 1:19 的混合比中,通常可观察到 54-86%的独特次要供体等位基因。灵敏度的提高结合了较小扩增子提供的稳健性,极大地提高了从降解样本中获得的数据量,改进的化学性质对高水平的实验室制备抑制剂具有卓越的耐受性。