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整合 '-omics' 和天然产物发现平台,以研究微生物组中的代谢交换。

Integrating '-omics' and natural product discovery platforms to investigate metabolic exchange in microbiomes.

机构信息

Department of Chemistry and Biochemistry, University of California at San Diego, La Jolla, CA 92093, USA.

出版信息

Curr Opin Chem Biol. 2011 Feb;15(1):79-87. doi: 10.1016/j.cbpa.2010.10.025. Epub 2010 Nov 17.

Abstract

The microbiome is an abundance of microorganisms within a host (e.g. human microbiome). These microorganisms produce small molecules and metabolites that have been shown to affect and dictate the physiology of an individual. Functional knowledge of these molecules, often produced for communication or defense, will reveal the interplay between microbes and host in health and disease. The vast diversity in structure and function of microbiome-associated small molecules necessitate tools that will utilize multiple '-omics' strategies to understand the interactions within the human microbiome. This review discusses the importance of these investigations and the integration of current '-omics' technologies with tools established in natural product discovery in order to identify and characterize uncharacterized small molecules in the effort towards diagnostic modeling of the human microbiome.

摘要

微生物组是宿主(例如人类微生物组)内大量的微生物。这些微生物产生的小分子和代谢物已被证明会影响和决定个体的生理机能。对这些分子(通常用于通讯或防御)的功能了解将揭示微生物和宿主在健康和疾病中的相互作用。微生物组相关小分子在结构和功能上的巨大多样性需要使用多种“组学”策略的工具来理解人类微生物组内的相互作用。本文综述了这些研究的重要性,并讨论了将当前的“组学”技术与天然产物发现中建立的工具相结合,以鉴定和表征未表征的小分子,从而朝着人类微生物组的诊断模型努力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f0de/3174688/e31f4452ece3/nihms-254322-f0001.jpg

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