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里氏放线菌属一新种,从地衣中分离得到。

Actinomycetospora rishiriensis sp. nov., isolated from a lichen.

机构信息

Division of Applied Biological Sciences, Interdisciplinary Graduate School of Medicine and Engineering, University of Yamanashi, Takeda-4, Kofu 400-8511, Japan.

NITE Biological Resource Center, National Institute of Technology and Evaluation, Kazusakamatari 2-5-8, Kisarazu, Chiba 292-0818, Japan.

出版信息

Int J Syst Evol Microbiol. 2011 Nov;61(Pt 11):2621-2625. doi: 10.1099/ijs.0.028753-0. Epub 2010 Dec 10.

Abstract

An actinomycete, strain RI109-Li102(T), was isolated from a lichen sample obtained from Rishiri Island in Japan. Cells of strain RI109-Li102(T) were Gram-positive, aerobic and non-motile and formed bud-like spore chains. The isolate grew with 0-3 % (w/v) NaCl, at pH 5-9 and at 10-30 °C (optimum 30 °C). The whole-cell hydrolysate contained meso-diaminopimelic acid, arabinose and galactose. The predominant menaquinone was MK-8(H(4)) and the diagnostic phospholipids were phosphatidylethanolamine, phosphatidylcholine, phosphatidylinositol and diphosphatidylglycerol. The major cellular fatty acids were iso-C(16 : 0) and iso-C(16 : 1) H. Comparative 16S rRNA gene sequence analysis revealed that strain RI109-Li102(T) was most closely related to Actinomycetospora corticicola 014-5(T) (99.0 % rRNA gene sequence similarity) and Actinomycetospora chiangmaiensis YIM 0006(T) (98.4 %). However, DNA-DNA hybridization assays, as well as physiological and biochemical analyses, showed that strain RI109-Li102(T) could be differentiated from its closest phylogenetic relatives. It is proposed that strain RI109-Li102(T) ( = NBRC 106356(T) = KCTC 19782(T)) be classified as the type strain of a novel species, with the name Actinomycetospora rishiriensis sp. nov.

摘要

一株放线菌,菌株 RI109-Li102(T),从日本利尻岛的地衣样本中分离得到。菌株 RI109-Li102(T)的细胞呈革兰氏阳性,需氧,不运动,形成芽状孢子链。该菌在 0-3%(w/v)NaCl、pH5-9 和 10-30°C(最适 30°C)的条件下生长。全细胞水解物含有meso-二氨基庚二酸、阿拉伯糖和半乳糖。主要的menaquinone 是 MK-8(H(4)),诊断性磷脂是磷脂酰乙醇胺、磷脂酰胆碱、磷脂酰肌醇和双磷脂酰甘油。主要的细胞脂肪酸是 iso-C(16:0)和 iso-C(16:1) H。比较 16S rRNA 基因序列分析表明,菌株 RI109-Li102(T)与 Actinomycetospora corticicola 014-5(T)(99.0%rRNA 基因序列相似性)和 Actinomycetospora chiangmaiensis YIM 0006(T)(98.4%)最为密切相关。然而,DNA-DNA 杂交试验以及生理生化分析表明,菌株 RI109-Li102(T)与它最接近的系统发育相关物是可区分的。因此,建议菌株 RI109-Li102(T)(=NBRC 106356(T)=KCTC 19782(T))被分类为一个新种的模式菌株,命名为 Actinomycetospora rishiriensis sp. nov.

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