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伊氏游动放线菌,一种新的放线菌,从地衣样本中分离得到。

Actinomycetospora iriomotensis sp. nov., a novel actinomycete isolated from a lichen sample.

机构信息

Division of Applied Biological Sciences, Interdisciplinary Graduate School of Medicine and Engineering, University of Yamanashi, Kofu, Yamanashi, Japan.

出版信息

J Antibiot (Tokyo). 2011 Apr;64(4):289-92. doi: 10.1038/ja.2011.15. Epub 2011 Mar 9.

Abstract

An actinomycete strain, IR73-Li102(T), was isolated from a lichen sample obtained from Iriomote Island, Japan, and subsequently characterized using a polyphasic approach. Comparative 16S rRNA gene sequence analysis revealed that strain IR73-Li102(T) had the highest sequence similarities with Actinomycetospora chiangmaiensis YIM 0006(T) (98.3%), A. corticola 014-5(T) (98.1%) and A. rishiriensis RI109-Li102(T) (98.0%). However, DNA-DNA hybridization assays, as well as physiological and biochemical analyzes, showed that strain IR73-Li102(T) could be clearly differentiated from its closest phylogenetic relatives. The strain contained meso-diaminopimelic acid, and arabinose and galactose were present in whole-cell hydrolysates. The predominant menaquinone was MK-8(H(4)), and the diagnostic phospholipids were phosphatidylethanolamine, phosphatidylcholine, phosphatidylinositol and diphosphatidylglycerol. The major cellular fatty acid was iso-C(16:0) (58%). The chemotaxonomic properties of strain IR73-Li102(T) were consistent with those shared by members of the genus Actinomycetospora. On the basis of the phenotypic features and DNA-DNA hybridization data, strain IR73-Li102(T) (= NBRC 106365(T) = KCTC 19783(T)) represents a novel species of the genus Actinomycetospora, for which the name Actinomycetospora iriomotensis sp. nov. is proposed.

摘要

一株放线菌菌株 IR73-Li102(T) 从日本石垣岛的地衣样本中分离得到,随后采用多相分类法对其进行了特征描述。比较 16S rRNA 基因序列分析表明,菌株 IR73-Li102(T) 与 Actinomycetospora chiangmaiensis YIM 0006(T)(98.3%)、A. corticola 014-5(T)(98.1%)和 A. rishiriensis RI109-Li102(T)(98.0%)具有最高的序列相似性。然而,DNA-DNA 杂交试验以及生理生化分析表明,菌株 IR73-Li102(T) 可以与最接近的系统发育相关菌株明显区分开来。该菌株含有 meso-二氨基庚二酸,且全细胞水解物中存在阿拉伯糖和半乳糖。主要的menaquinone 为 MK-8(H(4)),诊断性磷脂为磷脂酰乙醇胺、磷脂酰胆碱、磷脂酰肌醇和双磷脂酰甘油。主要的细胞脂肪酸为 iso-C(16:0)(58%)。菌株 IR73-Li102(T) 的化学分类特征与 Actinomycetospora 属成员共有的特征一致。基于表型特征和 DNA-DNA 杂交数据,菌株 IR73-Li102(T)(=NBRC 106365(T)=KCTC 19783(T))代表 Actinomycetospora 属的一个新种,现命名为 Iriomote 放线菌 Actinomycetospora iriomotensis sp. nov.。

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