Division of Applied Biological Sciences, Interdisciplinary Graduate School of Medicine and Engineering, University of Yamanashi, Kofu, Japan.
J Antibiot (Tokyo). 2012 May;65(5):249-53. doi: 10.1038/ja.2012.8. Epub 2012 Feb 22.
The motile actinomycete strain RI50-RCA114(T) was isolated using rehydration and centrifugation method from a soil sample obtained from Rishiri Island in Japan. The taxonomic status of this organism was established using a polyphasic approach. Cells of strain RI50-RCA114(T) were Gram positive, aerobic, motile and formed irregular sporangia. The strain grew in the presence of 0-2% (w/v) NaCl, between pH 5 and 8, and over a temperature range of 20-37°C, with optimal growth at 30°C. Whole-cell hydrolysates of the strain contained meso-diaminopimelic acid, galactose, glucose and mannose, in addition to one unidentified O-methyl-hexose. The predominant menaquinone was MK-9(H(4)), and the major polar lipids comprised phosphatidylethanolamine, diphosphatidylglycerol and phosphatidyl-N-methylethylethanolamine. The major cellular fatty acids were iso-C(16:0), iso-C(15:0) and anteiso-C(17:0). Comparative 16S ribosomal RNA gene sequence analysis revealed that strain RI50-RCA114(T) had the closest sequence similarity with Actinoplanes globisporus JCM 3186(T) (97.6%). However, DNA-DNA hybridization assays as well as physiological and biochemical analyses differentiated strain RI50-RCA114(T) from its closest phylogenetic relative. On the basis of these data, we propose that strain RI50-RCA114(T) (=NBRC 108556(T)=BCC 49184(T)) be classified as the type strain of a novel Actinoplanes species and named Actinoplanes rishiriensis sp. nov.
运动放线菌 RI50-RCA114(T) 株是采用复水离心法从日本利尻岛的土壤样本中分离得到的。该生物的分类地位是通过多相方法确定的。RI50-RCA114(T) 株的细胞呈革兰氏阳性、需氧、运动性,形成不规则的孢子囊。该菌株在 0-2%(w/v)NaCl、pH5-8 和 20-37°C 的温度范围内生长,最佳生长温度为 30°C。该菌株的全细胞水解物含有meso-二氨基庚二酸、半乳糖、葡萄糖和甘露糖,以及一种未鉴定的 O-甲基-己糖。主要的menaquinone 是 MK-9(H(4)),主要的极性脂类包括磷脂酰乙醇胺、双磷脂酰甘油和磷脂酰-N-甲基乙醇胺。主要的细胞脂肪酸是 iso-C(16:0)、iso-C(15:0)和 anteiso-C(17:0)。比较 16S 核糖体 RNA 基因序列分析表明,RI50-RCA114(T)株与 Actinoplanes globisporus JCM 3186(T)(97.6%)具有最接近的序列相似性。然而,DNA-DNA 杂交试验以及生理生化分析将 RI50-RCA114(T)株与最接近的系统发育相关菌株区分开来。基于这些数据,我们建议将 RI50-RCA114(T)株(=NBRC 108556(T)=BCC 49184(T))归类为一种新型 Actinoplanes 种的模式菌株,并命名为 Actinoplanes rishiriensis sp. nov.