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结合多个基因系统发育和表型特征可区分出先前被鉴定为 Botryosphaeria dothidea 的几个物种。

Combined multiple gene genealogies and phenotypic characters differentiate several species previously identified as Botryosphaeria dothidea.

机构信息

Department of Microbiology and Plant Pathology, Forestry and Agricultural Biotechnology Institute, University of Pretoria, South Africa.

出版信息

Mycologia. 2004 Jan-Feb;96(1):83-101.

Abstract

Botryosphaeria dothidea is one of the most commonly reported species in a genus of important pathogens of woody plants. This taxon generally is accepted to represent a species complex, and hence its identity remains unclear. Previous studies either have treated B. dothidea as the valid name for B. ribis and B. berengeriana or argued for them to be separate entities. To add to the confusion, no ex-type cultures are available for either B. dothidea or B. ribis. The aim of the present study, therefore, was to recollect and characterize these fungi and designate a set of reference cultures that can be used in future studies. To this end, morphological, cultural and multi-allelic DNA sequence datasets from the rDNA (ITS 1, 5.8S, and ITS 2), β-tubulin and EF1-α genes were used to fully characterize these species. Botryosphaeria dothidea was found to be distinct from B. ribis, while B. berengeriana was retained as synonym of the former name. Furthermore, Fusicoccum aesculi is accepted as anamorph of B. dothidea, while the anamorph of B. ribis is newly described as F. ribis sp. nov. Botryosphaeria ribis could be distinguished from B. parva based on β-tubulin and EF1-α sequence data. A combined phylogeny of the three gene regions used in this study also showed that the genus Botryosphaeria represents two distinct phylogenetic assemblages that correspond to species with Diplodia and Fusicoccum anamorphs.

摘要

聚生小丛壳是木本植物重要病原菌属中最常报道的物种之一。该分类群通常被认为代表一个种复合体,因此其身份仍不清楚。以前的研究要么将 B. dothidea 视为 B. ribis 和 B. berengeriana 的有效名称,要么认为它们是独立的实体。更令人困惑的是,既没有 B. dothidea 也没有 B. ribis 的模式培养物。因此,本研究的目的是重新收集和描述这些真菌,并指定一套参考培养物,可用于未来的研究。为此,使用 rDNA(ITS 1、5.8S 和 ITS 2)、β-微管蛋白和 EF1-α 基因的形态学、文化和多等位基因 DNA 序列数据集,对这些物种进行了全面描述。发现 B. dothidea 与 B. ribis 不同,而 B. berengeriana 被保留为前者的同义词。此外,Fusicoccum aesculi 被接受为 B. dothidea 的无性型,而 B. ribis 的无性型则被新描述为 F. ribis sp. nov.。B. ribis 可以基于β-微管蛋白和 EF1-α 序列数据与 B. parva 区分开来。本研究中使用的三个基因区域的组合系统发育也表明,Botryosphaeria 属代表两个不同的系统发育组合,与 Diplodia 和 Fusicoccum 无性型相对应的物种。

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