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构建遗传多路复用器以在大肠杆菌中的化学感应途径之间切换。

Construction of a genetic multiplexer to toggle between chemosensory pathways in Escherichia coli.

机构信息

Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, CA 94158, USA.

出版信息

J Mol Biol. 2011 Feb 18;406(2):215-27. doi: 10.1016/j.jmb.2010.12.019. Epub 2010 Dec 23.

Abstract

Many applications require cells to switch between discrete phenotypic states. Here, we harness the FimBE inversion switch to flip a promoter, allowing expression to be toggled between two genes oriented in opposite directions. The response characteristics of the switch are characterized using two-color cytometry. This switch is used to toggle between orthogonal chemosensory pathways by controlling the expression of CheW and CheW*, which interact with the Tar (aspartate) and Tsr* (serine) chemoreceptors, respectively. CheW* and Tsr* each contain a mutation at their protein-protein interface such that they interact with each other. The complete genetic program containing an arabinose-inducible FimE controlling CheW/CheW* (and constitutively expressed tar/tsr*) is transformed into an Escherichia coli strain lacking all native chemoreceptors. This program enables bacteria to swim toward serine or aspartate in the absence or in the presence of arabinose, respectively. Thus, the program functions as a multiplexer with arabinose as the selector. This demonstrates the ability of synthetic genetic circuits to connect to a natural signaling network to switch between phenotypes.

摘要

许多应用都需要细胞在离散的表型状态之间切换。在这里,我们利用 FimBE 倒位开关来翻转启动子,使两个方向相反的基因的表达可以相互切换。通过控制 CheW 和 CheW的表达,该开关用于切换正交化学感应途径,CheW 和 CheW分别与 Tar(天冬氨酸)和 Tsr*(丝氨酸)化学感受器相互作用。CheW和 Tsr在其蛋白质-蛋白质界面处各有一个突变,使它们相互作用。包含阿拉伯糖诱导型 FimE 控制 CheW/CheW*(和组成型表达 tar/tsr*)的完整遗传程序被转化为缺乏所有天然化学感受器的大肠杆菌菌株。该程序使细菌能够在没有或存在阿拉伯糖的情况下分别向丝氨酸或天冬氨酸游动。因此,该程序作为一个多路复用器,以阿拉伯糖作为选择器。这证明了合成遗传电路能够连接到自然信号网络,从而在表型之间切换。

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