• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

酿酒酵母 Rap1 BRCT 结构域的溶液结构揭示了一种新的折叠方式。

Solution structure of Rap1 BRCT domain from Saccharomyces cerevisiae reveals a novel fold.

机构信息

Hefei National Laboratory for Physical Sciences at Microscale, School of Life Sciences, University of Science and Technology of China, Hefei, Anhui 230026, PR China.

出版信息

Biochem Biophys Res Commun. 2011 Jan 28;404(4):1055-9. doi: 10.1016/j.bbrc.2010.12.109. Epub 2010 Dec 25.

DOI:10.1016/j.bbrc.2010.12.109
PMID:21187076
Abstract

Rap1 (repressor-activator protein 1) from Saccharomyces cerevisiae, containing a BRCT domain at its N-terminus, is a multifunctional protein that controls telomere function, silencing, and the activation of glycolytic and ribosomal protein genes. In this work, we determined the solution structure of Rap1 BRCT domain, which contains three β-strands and three α-helices. Structural comparison indicated that Rap1 BRCT domain adopts a global fold similar to other BRCT domains, implying some common structural aspects of BRCT domain family. On the other hand, Rap1 BRCT domain displays structural characteristics significantly different from other BRCT domains in that Rap1 BRCT domain adopts a rather flexible conformation with less secondary structure elements, revealing a novel fold of the BRCT domain family.

摘要

酿酒酵母 Rap1(阻遏物激活蛋白 1),其 N 端含有一个 BRCT 结构域,是一种多功能蛋白,它控制端粒功能、沉默和糖酵解及核糖体蛋白基因的激活。在本工作中,我们确定了 Rap1 BRCT 结构域的溶液结构,它包含三个β-折叠和三个α-螺旋。结构比较表明 Rap1 BRCT 结构域采用了与其他 BRCT 结构域相似的整体折叠,暗示了 BRCT 结构域家族的一些共同结构方面。另一方面,Rap1 BRCT 结构域显示出与其他 BRCT 结构域明显不同的结构特征,因为 Rap1 BRCT 结构域采用了相当灵活的构象,具有较少的二级结构元件,揭示了 BRCT 结构域家族的一种新折叠。

相似文献

1
Solution structure of Rap1 BRCT domain from Saccharomyces cerevisiae reveals a novel fold.酿酒酵母 Rap1 BRCT 结构域的溶液结构揭示了一种新的折叠方式。
Biochem Biophys Res Commun. 2011 Jan 28;404(4):1055-9. doi: 10.1016/j.bbrc.2010.12.109. Epub 2010 Dec 25.
2
Structural and functional studies of the Rap1 C-terminus reveal novel separation-of-function mutants.Rap1 C末端的结构与功能研究揭示了新型功能分离突变体。
J Mol Biol. 2008 Jul 11;380(3):520-31. doi: 10.1016/j.jmb.2008.04.078. Epub 2008 May 17.
3
NMR structure of the hRap1 Myb motif reveals a canonical three-helix bundle lacking the positive surface charge typical of Myb DNA-binding domains.人源Rap1 Myb基序的核磁共振结构揭示了一种典型的三螺旋束,缺乏Myb DNA结合域特有的正表面电荷。
J Mol Biol. 2001 Sep 7;312(1):167-75. doi: 10.1006/jmbi.2001.4924.
4
The DNA-binding domain of yeast Rap1 interacts with double-stranded DNA in multiple binding modes.酵母Rap1的DNA结合结构域以多种结合模式与双链DNA相互作用。
Biochemistry. 2014 Dec 9;53(48):7471-83. doi: 10.1021/bi501049b. Epub 2014 Nov 21.
5
Isolation and characterization of Candida albicans homologue of RAP1, a repressor and activator protein gene in Saccharomyces cerevisiae.酿酒酵母中作为阻遏物和激活蛋白基因的RAP1的白色念珠菌同源物的分离与鉴定。
Yeast. 2004 Jan 15;21(1):1-10. doi: 10.1002/yea.1048.
6
Crystal structure of the YML079w protein from Saccharomyces cerevisiae reveals a new sequence family of the jelly-roll fold.来自酿酒酵母的YML079w蛋白的晶体结构揭示了果冻卷折叠的一个新序列家族。
Protein Sci. 2005 Jan;14(1):209-15. doi: 10.1110/ps.041121305.
7
NMR structure of the DNA-binding domain of the cell cycle protein Mbp1 from Saccharomyces cerevisiae.来自酿酒酵母的细胞周期蛋白Mbp1的DNA结合结构域的核磁共振结构。
Biochemistry. 2003 Feb 11;42(5):1266-73. doi: 10.1021/bi0205247.
8
Structural modeling identified the tRNA-binding domain of Utp8p, an essential nucleolar component of the nuclear tRNA export machinery of Saccharomyces cerevisiae.结构建模确定了Utp8p的tRNA结合结构域,Utp8p是酿酒酵母细胞核tRNA输出机制中一个必需的核仁组分。
Biochem Cell Biol. 2009 Apr;87(2):431-43. doi: 10.1139/o08-145.
9
Solution structure of the ubiquitin-binding domain in Swa2p from Saccharomyces cerevisiae.酿酒酵母Swa2p中泛素结合结构域的溶液结构
Proteins. 2004 Mar 1;54(4):784-93. doi: 10.1002/prot.10636.
10
Rap1 in Candida albicans: an unusual structural organization and a critical function in suppressing telomere recombination.白念珠菌中的 Rap1:一种不寻常的结构组织和在抑制端粒重组中的关键功能。
Mol Cell Biol. 2010 Mar;30(5):1254-68. doi: 10.1128/MCB.00986-09. Epub 2009 Dec 14.

引用本文的文献

1
Dependence of Protein Structure on Environment: FOD Model Applied to Membrane Proteins.蛋白质结构对环境的依赖性:应用于膜蛋白的FOD模型
Membranes (Basel). 2021 Dec 30;12(1):50. doi: 10.3390/membranes12010050.
2
In Silico Modeling of the Influence of Environment on Amyloid Folding Using FOD-M Model.使用 FOD-M 模型对环境对淀粉样蛋白折叠影响的计算机模拟。
Int J Mol Sci. 2021 Sep 30;22(19):10587. doi: 10.3390/ijms221910587.
3
IUPred3: prediction of protein disorder enhanced with unambiguous experimental annotation and visualization of evolutionary conservation.
IUPred3:利用明确的实验注释和进化保守性可视化增强的蛋白质无序性预测。
Nucleic Acids Res. 2021 Jul 2;49(W1):W297-W303. doi: 10.1093/nar/gkab408.
4
Identification of a transcriptional activation domain in yeast repressor activator protein 1 (Rap1) using an altered DNA-binding specificity variant.利用具有改变的DNA结合特异性的变体鉴定酵母阻遏激活蛋白1(Rap1)中的转录激活结构域。
J Biol Chem. 2017 Apr 7;292(14):5705-5723. doi: 10.1074/jbc.M117.779181. Epub 2017 Feb 14.
5
A higher-order entity formed by the flexible assembly of RAP1 with TRF2.由RAP1与TRF2灵活组装形成的高阶实体。
Nucleic Acids Res. 2016 Feb 29;44(4):1962-76. doi: 10.1093/nar/gkv1531. Epub 2016 Jan 8.
6
Heterochromatin formation via recruitment of DNA repair proteins.通过募集DNA修复蛋白形成异染色质。
Mol Biol Cell. 2015 Apr 1;26(7):1395-410. doi: 10.1091/mbc.E14-09-1413. Epub 2015 Jan 28.
7
Molecular Dynamics Simulation of Rap1 Myb-type domain in Saccharomyces cerevisiae.酿酒酵母中Rap1 Myb型结构域的分子动力学模拟
Bioinformation. 2012;8(18):881-5. doi: 10.6026/97320630008881. Epub 2012 Sep 21.
8
Telomerase and telomere-associated proteins: structural insights into mechanism and evolution.端粒酶和端粒相关蛋白:机制和进化的结构见解。
Structure. 2012 Jan 11;20(1):28-39. doi: 10.1016/j.str.2011.10.017.
9
The orientation of the C-terminal domain of the Saccharomyces cerevisiae Rap1 protein is determined by its binding to DNA.酿酒酵母 Rap1 蛋白 C 端结构域的取向由其与 DNA 的结合决定。
Nucleic Acids Res. 2012 Apr;40(7):3197-207. doi: 10.1093/nar/gkr1166. Epub 2011 Dec 1.