• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

组氨酸的质子化、互变异构和构象异构体:魔角旋转固态 NMR 的综合研究。

Protonation, tautomerization, and rotameric structure of histidine: a comprehensive study by magic-angle-spinning solid-state NMR.

机构信息

Department of Chemistry, Iowa State University, Ames, Iowa 50011, United States.

出版信息

J Am Chem Soc. 2011 Feb 9;133(5):1534-44. doi: 10.1021/ja108943n. Epub 2011 Jan 5.

DOI:10.1021/ja108943n
PMID:21207964
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4082993/
Abstract

Histidine structure and chemistry lie at the heart of many enzyme active sites, ion channels, and metalloproteins. While solid-state NMR spectroscopy has been used to study histidine chemical shifts, the full pH dependence of the complete panel of (15)N, (13)C, and (1)H chemical shifts and the sensitivity of these chemical shifts to tautomeric structure have not been reported. Here we use magic-angle-spinning solid-state NMR spectroscopy to determine the (15)N, (13)C, and (1)H chemical shifts of histidine from pH 4.5 to 11. Two-dimensional homonuclear and heteronuclear correlation spectra indicate that these chemical shifts depend sensitively on the protonation state and tautomeric structure. The chemical shifts of the rare π tautomer were observed for the first time, at the most basic pH used. Intra- and intermolecular hydrogen bonding between the imidazole nitrogens and the histidine backbone or water was detected, and N-H bond length measurements indicated the strength of the hydrogen bond. We also demonstrate the accurate measurement of the histidine side-chain torsion angles χ(1) and χ(2) through backbone-side chain (13)C-(15)N distances; the resulting torsion angles were within 4° of the crystal structure values. These results provide a comprehensive set of benchmark values for NMR parameters of histidine over a wide pH range and should facilitate the study of functionally important histidines in proteins.

摘要

组氨酸的结构和化学性质是许多酶活性位点、离子通道和金属蛋白的核心。虽然固态 NMR 光谱学已被用于研究组氨酸的化学位移,但完整的 pH 依赖的(15)N、(13)C 和(1)H 化学位移以及这些化学位移对互变异构结构的灵敏度尚未被报道。在这里,我们使用魔角旋转固态 NMR 光谱学来确定组氨酸的(15)N、(13)C 和(1)H 化学位移,pH 值范围为 4.5 到 11。二维同核和异核相关谱表明,这些化学位移对质子化状态和互变异构结构敏感。首次在使用的最碱性 pH 值下观察到了罕见的π互变异构体的化学位移。在组氨酸骨架或水中,咪唑氮原子之间存在着分子内和分子间氢键,N-H 键长的测量表明氢键的强度。我们还通过骨架-侧链(13)C-(15)N 距离证明了准确测量组氨酸侧链扭转角 χ(1)和 χ(2)的方法;得到的扭转角与晶体结构值相差 4°以内。这些结果为在较宽 pH 范围内组氨酸的 NMR 参数提供了一套全面的基准值,应有助于研究蛋白质中功能重要的组氨酸。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/33c53aa70f80/nihms-591529-f0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/c60d226522db/nihms-591529-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/2709e35b587c/nihms-591529-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/0c715108b94c/nihms-591529-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/5f955b0c5f94/nihms-591529-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/c6486c4e8bd8/nihms-591529-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/f8072ebb939d/nihms-591529-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/ec7c7386fdbd/nihms-591529-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/33c53aa70f80/nihms-591529-f0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/c60d226522db/nihms-591529-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/2709e35b587c/nihms-591529-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/0c715108b94c/nihms-591529-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/5f955b0c5f94/nihms-591529-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/c6486c4e8bd8/nihms-591529-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/f8072ebb939d/nihms-591529-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/ec7c7386fdbd/nihms-591529-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d2d/4082993/33c53aa70f80/nihms-591529-f0009.jpg

相似文献

1
Protonation, tautomerization, and rotameric structure of histidine: a comprehensive study by magic-angle-spinning solid-state NMR.组氨酸的质子化、互变异构和构象异构体:魔角旋转固态 NMR 的综合研究。
J Am Chem Soc. 2011 Feb 9;133(5):1534-44. doi: 10.1021/ja108943n. Epub 2011 Jan 5.
2
Revealing weak histidine N homonuclear scalar couplings using Solid-State Magic-Angle-Spinning NMR spectroscopy.利用固态魔角旋转 NMR 光谱揭示弱组氨酸 N 同核标量耦合。
J Magn Reson. 2020 Jul;316:106757. doi: 10.1016/j.jmr.2020.106757. Epub 2020 Jun 1.
3
13C and 15N spectral editing inside histidine imidazole ring through solid-state NMR spectroscopy.通过固态 NMR 光谱学对组氨酸咪唑环内的 13C 和 15N 光谱进行编辑。
Solid State Nucl Magn Reson. 2013 Jul-Sep;54:13-7. doi: 10.1016/j.ssnmr.2013.05.002. Epub 2013 May 15.
4
A solid state 13C NMR, crystallographic, and quantum chemical investigation of chemical shifts and hydrogen bonding in histidine dipeptides.组氨酸二肽中化学位移和氢键的固态¹³C核磁共振、晶体学及量子化学研究。
J Am Chem Soc. 2005 Sep 14;127(36):12544-54. doi: 10.1021/ja051528c.
5
Hydrogen-bonding partner of the proton-conducting histidine in the influenza M2 proton channel revealed from 1H chemical shifts.质子通道中质子传导组氨酸的氢键供体通过 1H 化学位移揭示。
J Am Chem Soc. 2012 Sep 12;134(36):14753-5. doi: 10.1021/ja307453v. Epub 2012 Aug 30.
6
Assessing the fractions of tautomeric forms of the imidazole ring of histidine in proteins as a function of pH.评估组氨酸咪唑环的互变异构形式在蛋白质中随 pH 值变化的分数。
Proc Natl Acad Sci U S A. 2011 Apr 5;108(14):5602-7. doi: 10.1073/pnas.1102373108. Epub 2011 Mar 21.
7
Interaction between histidine and Zn(II) metal ions over a wide pH as revealed by solid-state NMR spectroscopy and DFT calculations.通过固态 NMR 光谱和 DFT 计算揭示了在宽 pH 范围内组氨酸与 Zn(II)金属离子的相互作用。
J Phys Chem B. 2013 Aug 1;117(30):8954-65. doi: 10.1021/jp4041937. Epub 2013 Jul 22.
8
Probing the binding modes and dynamics of histidine on fumed silica surfaces by solid-state NMR.通过固态 NMR 研究组氨酸在烟硅胶表面的结合模式和动力学。
Phys Chem Chem Phys. 2020 Sep 23;22(36):20349-20361. doi: 10.1039/d0cp03472j.
9
Imidazole-Imidazole Hydrogen Bonding in the pH-Sensing Histidine Side Chains of Influenza A M2.流感 A M2 中 pH 感应组氨酸侧链的咪唑-咪唑氢键作用
J Am Chem Soc. 2020 Feb 12;142(6):2704-2708. doi: 10.1021/jacs.9b10984. Epub 2020 Jan 30.
10
NMR detection of pH-dependent histidine-water proton exchange reveals the conduction mechanism of a transmembrane proton channel.NMR 检测 pH 依赖的组氨酸-水质子交换揭示了跨膜质子通道的传导机制。
J Am Chem Soc. 2012 Feb 29;134(8):3703-13. doi: 10.1021/ja2081185. Epub 2011 Oct 21.

引用本文的文献

1
Structural Transition from Closed to Open for the Influenza A M2 Proton Channel as Observed by Proton-Detected Solid-State NMR.通过质子检测固态核磁共振观察甲型流感病毒M2质子通道从关闭到开放的结构转变
J Am Chem Soc. 2025 Aug 6;147(31):27537-27551. doi: 10.1021/jacs.5c05111. Epub 2025 Jun 20.
2
Phenotypic landscape of an invasive fungal pathogen reveals its unique biology.一种侵袭性真菌病原体的表型图谱揭示了其独特生物学特性。
Cell. 2025 Jun 9. doi: 10.1016/j.cell.2025.05.017.
3
A histidine switch regulates pH-dependent filament formation by the caspase-9 CARD.

本文引用的文献

1
Mechanisms of proton conduction and gating in influenza M2 proton channels from solid-state NMR.固态 NMR 研究流感 M2 质子通道的质子传导和门控机制。
Science. 2010 Oct 22;330(6003):505-8. doi: 10.1126/science.1191714.
2
The impact of hydrogen bonding on amide 1H chemical shift anisotropy studied by cross-correlated relaxation and liquid crystal NMR spectroscopy.氢键对酰胺 1H 化学位移各向异性的影响通过交叉相关弛豫和液晶 NMR 光谱研究。
J Am Chem Soc. 2010 Aug 11;132(31):10866-75. doi: 10.1021/ja103629e.
3
Water-protein interactions of an arginine-rich membrane peptide in lipid bilayers investigated by solid-state nuclear magnetic resonance spectroscopy.
一个组氨酸开关通过半胱天冬酶-9的CARD结构域调节pH依赖性的丝状结构形成。
bioRxiv. 2025 Jun 3:2025.06.02.657148. doi: 10.1101/2025.06.02.657148.
4
In Silico Identification of 2,4-Diaminopyrimidine-Based Compounds as Potential CK1ε Inhibitors.基于2,4-二氨基嘧啶的化合物作为潜在CK1ε抑制剂的计算机模拟鉴定
Pharmaceuticals (Basel). 2025 May 17;18(5):741. doi: 10.3390/ph18050741.
5
Histidine 73 methylation coordinates β-actin plasticity in response to key environmental factors.组氨酸73甲基化可协调β-肌动蛋白的可塑性以响应关键环境因素。
Nat Commun. 2025 Mar 7;16(1):2304. doi: 10.1038/s41467-025-57458-6.
6
Proteolytic therapeutic modalities for amyloidoses: Insights into immunotherapy, PROTAC, and photo-oxygenation.用于淀粉样变性的蛋白水解治疗方法:对免疫疗法、PROTAC和光氧化的见解。
Neurotherapeutics. 2025 Apr;22(3):e00548. doi: 10.1016/j.neurot.2025.e00548. Epub 2025 Feb 11.
7
Raman signatures of type A and B influenza viruses: molecular origin of the "" inactivation mechanism mediated by micrometric silicon nitride powder.甲型和乙型流感病毒的拉曼特征:由微米级氮化硅粉末介导的“失活机制”的分子起源。
RSC Chem Biol. 2025 Jan 22;6(2):182-208. doi: 10.1039/d4cb00237g. eCollection 2025 Feb 5.
8
Natural Gomesin-like Peptides with More Selective Antifungal Activities.具有更高选择性抗真菌活性的天然类戈麦辛肽。
Pharmaceutics. 2024 Dec 17;16(12):1606. doi: 10.3390/pharmaceutics16121606.
9
Covalent Targeting of Histidine Residues with Aryl Fluorosulfates: Application to Mcl-1 BH3 Mimetics.芳基氟硫酸酯的组氨酸残基共价靶向:在 Mcl-1 BH3 模拟物中的应用。
J Med Chem. 2024 Nov 28;67(22):20214-20223. doi: 10.1021/acs.jmedchem.4c01541. Epub 2024 Nov 12.
10
Phenotypic landscape of a fungal meningitis pathogen reveals its unique biology.一种真菌性脑膜炎病原体的表型图谱揭示了其独特生物学特性。
bioRxiv. 2024 Oct 29:2024.10.22.619677. doi: 10.1101/2024.10.22.619677.
采用固态核磁共振波谱法研究富含精氨酸的膜肽在双层脂膜中的水-蛋白相互作用。
J Phys Chem B. 2010 Mar 25;114(11):4063-9. doi: 10.1021/jp912283r.
4
Structure and function of the influenza A M2 proton channel.甲型流感病毒M2质子通道的结构与功能
Biochemistry. 2009 Aug 11;48(31):7356-64. doi: 10.1021/bi9008837.
5
Accurate measurement of methyl 13C chemical shifts by solid-state NMR for the determination of protein side chain conformation: the influenza a M2 transmembrane peptide as an example.通过固态核磁共振准确测量甲基13C化学位移以确定蛋白质侧链构象:以甲型流感病毒M2跨膜肽为例
J Am Chem Soc. 2009 Jun 10;131(22):7806-16. doi: 10.1021/ja901550q.
6
Cytochrome c oxidase: exciting progress and remaining mysteries.细胞色素c氧化酶:令人振奋的进展与未解之谜
J Bioenerg Biomembr. 2008 Oct;40(5):521-31. doi: 10.1007/s10863-008-9181-7. Epub 2008 Oct 31.
7
Characterization of conformational exchange of a histidine side chain: protonation, rotamerization, and tautomerization of His61 in plastocyanin from Anabaena variabilis.组氨酸侧链构象交换的表征:可变鱼腥藻质体蓝素中His61的质子化、旋转异构体化和互变异构化
J Am Chem Soc. 2008 Jul 2;130(26):8460-70. doi: 10.1021/ja801330h. Epub 2008 Jun 7.
8
How Does an Amide-N Chemical Shift Tensor Vary in Peptides?肽中酰胺氮化学位移张量如何变化?
J Phys Chem B. 2004 Oct 21;108(42):16577-16585. doi: 10.1021/jp0471913.
9
Chemical-shift anisotropy measurements of amide and carbonyl resonances in a microcrystalline protein with slow magic-angle spinning NMR spectroscopy.利用慢魔角旋转核磁共振光谱对微晶蛋白中的酰胺和羰基共振进行化学位移各向异性测量。
J Am Chem Soc. 2007 May 2;129(17):5318-9. doi: 10.1021/ja0701199. Epub 2007 Apr 11.
10
Histidines, heart of the hydrogen ion channel from influenza A virus: toward an understanding of conductance and proton selectivity.组氨酸,甲型流感病毒氢离子通道的核心:迈向对电导和质子选择性的理解
Proc Natl Acad Sci U S A. 2006 May 2;103(18):6865-70. doi: 10.1073/pnas.0601944103. Epub 2006 Apr 21.