Centre for Comparative Genomics, Murdoch University, Murdoch, WA, 6150, Australia.
Funct Integr Genomics. 2011 Mar;11(1):37-48. doi: 10.1007/s10142-010-0208-x. Epub 2011 Jan 8.
Artificial selection (domestication and breeding) leaves a strong footprint in plant genomes. Second generation high throughput DNA sequencing technologies make it possible to sequence the gene complement of a plant genome within 3 to 5 months, and the costs of doing so are declining very quickly. This makes it practical to identify genomic regions that have undergone very strong selection. Available reference sequences of important crops such as rice, maize, and sorghum will promote the wide use of re-sequencing strategies in these crops. Marker/trait associations, especially haplotype (or haplotype block) association analyses, will help the precise mapping of important genomic regions and location of favored alleles or haplotypes for breeding. This mini-review examines a genomics approach to defining yield traits in wheat.
人工选择(驯化和选育)在植物基因组中留下了深刻的印记。第二代高通量 DNA 测序技术使得在 3 到 5 个月内对植物基因组的基因组成进行测序成为可能,而且测序的成本正在迅速下降。这使得鉴定经历了强烈选择的基因组区域成为可能。水稻、玉米和高粱等重要作物的现有参考序列将促进这些作物中重测序策略的广泛应用。标记/性状关联,特别是单倍型(或单倍型块)关联分析,将有助于精确绘制重要基因组区域和有利等位基因或单倍型的位置,用于育种。这篇简要回顾检查了一种基因组学方法,用于定义小麦的产量性状。